ggKbase home page

SCNpilot_cont_500_bf_scaffold_100_170

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 188177..189469

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1J4_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 418.0
  • Bit_score: 628
  • Evalue 5.40e-177
  • rbh
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KIA89071.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 418.0
  • Bit_score: 668
  • Evalue 6.50e-189
MscS Mechanosensitive ion channel; K16053 miniconductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 418.0
  • Bit_score: 628
  • Evalue 1.70e-177
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chryseobacterium jeonii → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1293
ATGACAAACAGTTTTCTTATTTTTGTGCCGATGAACGATGAACTGAAAGATACCAAAGATTTCCTGCAGGACATGAGCGATCGCATTCATTTTTTTGTGAGCGATATGCTTCCTGAACGTTGGATTTTGCTGGTACAGATTATGTTTAAGTTCGCCTTTTTAACAGCATTAGTCTATCTTGTCGATTTTGTACTCAAGTTTATCCTCAACAGTATTTTCCGCGCTTTTTTTAATAAAGATCAATATCCTGTTTTGAAATCGGTTTACCAATCGCGTATTACCAACTCTTTGTCGCATCTCATTGCATTACTTTTCGGAAGTTTTGCCCTGCTTTCAGTTTTTTACAGGCATCCGAAAAGCTTCACTTTCTTAGAAAGGATGGTGGGTTTGGCTCTTGTTATTGTGGTAGCAGGAATGCTCTATCGTGCCCTGAGTGCTTTCCGCAATTATTTCATTATTAAAAAGGATTATTACAAAATTATTGCGCTGAATGCGGTTTCGCAAACCCTGAAAATAATGGGGAGTTTTGTATGTACCGTGGTAGCAATATGTGTAATTTTTGGCATCAGCAGCTCTGCAATTGTAGGTAGTTTGGGTGCTATTACTGCGGTTTTGGTGCTGATCTTTCGCGATACTATTCTTGGTTTTGTTACCGGATTGCATGTGGCAACCTCCAAAAACCTGAAAGTGGGCGACTGGATCGGAATCCCGAAGTATAATCTTGAGGGAAATATTCAGGACATTAATCTGCTAACCACCAAAATTCAAAATTTCGATAAAACGATTTCTACCATTCCAACCTACGATTTGCTCTCGACCGAAATAAAAAACATCCAGGTCATGTCGGAAAGCAATACCAGAAGGATCAAGCGCTCGATTATTTTTAACATTAATTCCTTTAAATTTTTAAATATAGAAAACATCGACCATCTGGCTCGCATTAACCTGATTTCCAGATATCTTTTGGAAAAGAAATCAGAAATCGTTAGTCAGCGCGAAAGAATAGACAACGCAGAGATGCTAATTAACGGGCGACAACTCACCAATATTGGTGTTTTTCGGGAATATGTGATAAAGTATCTGGAAAACAATACTTTTATCGATCAGAAAGAAACCATAATTGTGCGACAGCTCGAAAACACGCCGCAAGGTTTACCTTTAGAAATATACTGTTTTACCAATGATTCCCAATGGTCGAATTATGAGGATATCCAGGCCGATATATTTGATCATTTACTGGTGGCCTCCAAAGAATTTGATCTGCAGATTATGCAGTTTGCCAAAAATATATGA
PROTEIN sequence
Length: 431
MTNSFLIFVPMNDELKDTKDFLQDMSDRIHFFVSDMLPERWILLVQIMFKFAFLTALVYLVDFVLKFILNSIFRAFFNKDQYPVLKSVYQSRITNSLSHLIALLFGSFALLSVFYRHPKSFTFLERMVGLALVIVVAGMLYRALSAFRNYFIIKKDYYKIIALNAVSQTLKIMGSFVCTVVAICVIFGISSSAIVGSLGAITAVLVLIFRDTILGFVTGLHVATSKNLKVGDWIGIPKYNLEGNIQDINLLTTKIQNFDKTISTIPTYDLLSTEIKNIQVMSESNTRRIKRSIIFNINSFKFLNIENIDHLARINLISRYLLEKKSEIVSQRERIDNAEMLINGRQLTNIGVFREYVIKYLENNTFIDQKETIIVRQLENTPQGLPLEIYCFTNDSQWSNYEDIQADIFDHLLVASKEFDLQIMQFAKNI*