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SCNpilot_cont_500_bf_scaffold_100

Search features with annotation key words

Displaying items 1-30 of 207 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_100_1
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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77..505
DNA (429bp) protein (143aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
Histidine--tRNA ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X109_FLAB3
SCNpilot_cont_500_bf_scaffold_100_2
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

507..1316
DNA (810bp) protein (270aa)
Hypothetical SAM-dependent methyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X112_FLAB3 rbh
Methyltransferase type 12 {ECO:0000313|EMBL:KIA88065.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical SAM-dependent methyltransferase rbh
SCNpilot_cont_500_bf_scaffold_100_trna_1
unknown

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1361..1434
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_100_3
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1556..1939)
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=L8K236_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDN75722.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_100_4
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1926..2690)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K3G7_9FLAO rbh
Aminotransferase class I and II {ECO:0000313|EMBL:KIC64735.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_100_5
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2763..3236)
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00094203};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseoba
SpoT methyltransferase superfamily protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6F1_FLAB3
SCNpilot_cont_500_bf_scaffold_100_6
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3267..4265
DNA (999bp) protein (333aa)
Ribonuclease BN (EC:3.1.-.-); K07058 membrane protein rbh
Ribonuclease BN {ECO:0000313|EMBL:ACU07988.1}; EC=3.1.-.- {ECO:0000313|EMBL:ACU07988.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Ribonuclease BN n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6F0_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_100_7
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4278..5456)
DNA (1179bp) protein (393aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6E9_FLAB3 rbh
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_100_8
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5474..7678)
DNA (2205bp) protein (735aa)
GTP pyrophosphokinase {ECO:0000313|EMBL:ACU07986.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ACU07986.1};; EC=3.1.7.2 {ECO:0000313|EMBL:ACU07986.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
GTP pyrophosphokinase (EC:2.7.6.5 3.1.7.2); K00951 GTP pyrophosphokinase [EC:2.7.6.5] rbh
GTP pyrophosphokinase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6E8_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_100_9
unknown

Not on your lists

7736..7825
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_100_10
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7840..9213
DNA (1374bp) protein (458aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] rbh
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:ACU07984.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ACU07984.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6E6_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_100_11
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9218..10384
DNA (1167bp) protein (389aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Sensor histidine kinase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6E5_FLAB3 rbh
sensor histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_100_12
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10419..12761)
DNA (2343bp) protein (781aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
ATP-dependent DNA helicase UvrD; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6F4_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_100_13
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12942..13949
DNA (1008bp) protein (336aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] rbh
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1M5_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_100_14
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14021..15046
DNA (1026bp) protein (342aa)
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T2E5_9FLAO rbh
Mandelate racemase {ECO:0000313|EMBL:KIA89078.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
chloromuconate cycloisomerase rbh
SCNpilot_cont_500_bf_scaffold_100_15
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15477..16190)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1M7_FLAB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEY20355.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_100_16
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16374..17495)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W6T1_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KEY20358.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_cont_500_bf_scaffold_100_17
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17676..19349
DNA (1674bp) protein (558aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
glutaminyl-tRNA synthetase n=1 Tax=Riemerella columbina RepID=UPI00036370F0 rbh
Glutamyl- and glutaminyl-tRNA synthetase rbh
SCNpilot_cont_500_bf_scaffold_100_18
unknown

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comp(19486..19599)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_100_19
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19665..20834
DNA (1170bp) protein (390aa)
Putative disulphide-isomerase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1M9_FLAB3 rbh
Disulfide isomerase {ECO:0000313|EMBL:KIA89081.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
disulfide-isomerase rbh
SCNpilot_cont_500_bf_scaffold_100_20
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20865..21476
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1N0_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08343.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_100_21
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21478..21681
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1N1_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08344.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_100_22
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21755..22747
DNA (993bp) protein (331aa)
tRNA dihydrouridine synthase B (EC:1.-.-.-) rbh
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
tRNA-dihydrouridine synthase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1N2_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_100_23
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22850..23758
DNA (909bp) protein (303aa)
ABC transporter, ATP-binding protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1N4_FLAB3 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIA89085.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_100_24
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23791..25107
DNA (1317bp) protein (439aa)
Membrane protein, putative n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1N5_FLAB3 rbh
ABC transporter permease {ECO:0000313|EMBL:KIA89086.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein; K01992 ABC-2 type transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_100_25
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25297..26280
DNA (984bp) protein (328aa)
pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] rbh
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T9L8_9FLAO rbh
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit {ECO:0000313|EMBL:EJL74817.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
SCNpilot_cont_500_bf_scaffold_100_26
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26389..28383
DNA (1995bp) protein (665aa)
Kup system potassium uptake protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X415_FLAB3 rbh
Kup system potassium uptake protein {ECO:0000313|EMBL:ACU07153.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Kup system potassium uptake protein; K03549 KUP system potassium uptake protein rbh
SCNpilot_cont_500_bf_scaffold_100_27
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28471..28944
DNA (474bp) protein (158aa)
Ferric uptake regulation protein FUR n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X416_FLAB3
Fur family transcriptional regulator {ECO:0000313|EMBL:KIA83798.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
Ferric uptake regulation protein FUR; K03711 Fur family transcriptional regulator, ferric uptake regulator
SCNpilot_cont_500_bf_scaffold_100_28
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28944..30680
DNA (1737bp) protein (579aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X417_FLAB3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU07155.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_100_29
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30744..31922
DNA (1179bp) protein (393aa)
Aminotransferase class-III n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X418_FLAB3 rbh
Aminotransferase class III {ECO:0000313|EMBL:KFF28926.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
aminotransferase class-III rbh
Displaying items 1-30 of 207 in total

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