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SCNpilot_cont_500_bf_scaffold_100

Search features with annotation key words

Displaying items 31-60 of 207 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_100_30
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32026..32625
DNA (600bp) protein (200aa)
Transcriptional regulator n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KFE8_9FLAO
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC61524.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
regulatory protein TetR
SCNpilot_cont_500_bf_scaffold_100_31
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32689..34056
DNA (1368bp) protein (456aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W218_9FLAO rbh
Transporter {ECO:0000313|EMBL:KFF29777.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
outer membrane efflux protein rbh
SCNpilot_cont_500_bf_scaffold_100_32
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34067..35125
DNA (1059bp) protein (353aa)
RND family efflux transporter, MFP subunit n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JVG9_9FLAO rbh
RND transporter {ECO:0000313|EMBL:KFF00881.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
RND family efflux transporter MFP subunit rbh
SCNpilot_cont_500_bf_scaffold_100_33
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35135..38311
DNA (3177bp) protein (1059aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W220_9FLAO rbh
Acriflavin resistance protein {ECO:0000313|EMBL:KFF12357.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
SCNpilot_cont_500_bf_scaffold_100_34
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38453..39592)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3N7_FLAB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEY20125.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_100_35
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39628..41616)
DNA (1989bp) protein (663aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3N8_FLAB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEY20126.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_100_36
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41707..43560)
DNA (1854bp) protein (618aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3N8_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA88850.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_100_37
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43724..45331
DNA (1608bp) protein (536aa)
GldJ n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3N9_FLAB3 rbh
Gliding motility protein GldJ {ECO:0000313|EMBL:KIA88851.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
GldJ rbh
SCNpilot_cont_500_bf_scaffold_100_38
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

45397..46671
DNA (1275bp) protein (425aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W707_9FLAO rbh
SCNpilot_cont_500_bf_scaffold_100_39
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46672..47274)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3P1_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU07029.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_100_40
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

47311..47697
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3P2_FLAB3
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:KIA88854.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_100_41
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47777..48472)
DNA (696bp) protein (232aa)
ABC transporter related n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3P3_FLAB3 rbh
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KFF23156.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
ABC transporter; K09687 antibiotic transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_100_42
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

48969..49796
DNA (828bp) protein (276aa)
Betaine/carnitine/choline transporter (BCCT) family transporter n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1HCT1_9FLAO
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:EOR29704.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
choline/carnitine/betaine transporter; K02168 high-affinity choline transport protein
SCNpilot_cont_500_bf_scaffold_100_43
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

50049..50987
DNA (939bp) protein (313aa)
Choline/carnitine/betaine transporter n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CK16_ELIME
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:EOR29704.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
choline/carnitine/betaine transporter; K02168 high-affinity choline transport protein
SCNpilot_cont_500_bf_scaffold_100_44
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51138..52106)
DNA (969bp) protein (323aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Flavobacterium sp. CF136 RepID=J2SIZ5_9FLAO rbh
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:EJL65432.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
alcohol dehydrogenase zinc-binding domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_100_45
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(52103..52474)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHM6_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39825.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_100_46
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52552..53127)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000303069F rbh
cyclic nucleotide-binding protein rbh
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ABQ05864.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_cont_500_bf_scaffold_100_47
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

53284..53970
DNA (687bp) protein (229aa)
Probable two-component system response regulatory protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XUZ8_FLAIG rbh
Transcriptional regulator {ECO:0000313|EMBL:KFF17503.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
two-component system response regulatory protein; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR rbh
SCNpilot_cont_500_bf_scaffold_100_48
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

53981..54343
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037616BB
Uncharacterized protein {ECO:0000313|EMBL:KIC61472.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_100_49
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

54380..55786
DNA (1407bp) protein (469aa)
Two-component system sensor histidine kinase (EC:2.7.13.3) rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CCG52967.1};; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
Two-component system sensor histidine kinase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XUZ7_FLAIG rbh
SCNpilot_cont_500_bf_scaffold_100_50
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

55953..56663
DNA (711bp) protein (237aa)
Mg2+ transporter-C family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VPX2_9SPHI
Magnesium transporter MgtC {ECO:0000313|EMBL:KFF17501.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_cont_500_bf_scaffold_100_51
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

56686..59391
DNA (2706bp) protein (902aa)
magnesium-translocating P-type ATPase (EC:3.6.3.2)
Magnesium-transporting ATPase n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J4R7_9SPHI rbh
Magnesium ABC transporter ATPase {ECO:0000313|EMBL:KFF17500.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
SCNpilot_cont_500_bf_scaffold_100_52
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

59610..60758
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2H720_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:ERJ57496.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
cation efflux system protein; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
SCNpilot_cont_500_bf_scaffold_100_53
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

60794..63868
DNA (3075bp) protein (1025aa)
Membrane protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HQE0_9SPHI rbh
Membrane protein {ECO:0000313|EMBL:ERJ57495.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
cation efflux system protein; K07239 heavy-metal exporter, HME family rbh
SCNpilot_cont_500_bf_scaffold_100_54
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

63955..65244
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2IXS0_9SPHI rbh
Transporter {ECO:0000313|EMBL:KFF17497.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
outer membrane efflux protein rbh
SCNpilot_cont_500_bf_scaffold_100_55
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

65328..66119
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J4B8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KFF17496.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
SCNpilot_cont_500_bf_scaffold_100_56
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(66203..67495)
DNA (1293bp) protein (431aa)
Arsenical pump membrane protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YIY3_9SPHI
Arsenic transporter {ECO:0000313|EMBL:AKD53823.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
arsB; arsenical pump membrane protein
SCNpilot_cont_500_bf_scaffold_100_57
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

67652..68551
DNA (900bp) protein (300aa)
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8K0_NIAKG rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEW00172.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_100_58
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

68669..69670
DNA (1002bp) protein (334aa)
Pyridoxine 4-dehydrogenase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CH11_ELIME rbh
Pyridoxine 4-dehydrogenase {ECO:0000313|EMBL:EOR28602.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
pyridoxine 4-dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_100_59
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

69871..71067
DNA (1197bp) protein (399aa)
Major facilitator superfamily protein n=2 Tax=Elizabethkingia anophelis RepID=H0KTC9_9FLAO rbh
Multidrug transporter {ECO:0000313|EMBL:KIC61375.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
major facilitator superfamily protein rbh
Displaying items 31-60 of 207 in total

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