ggKbase home page

SCNpilot_cont_500_bf_scaffold_100_43

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 50049..50987

Top 3 Functional Annotations

Value Algorithm Source
Choline/carnitine/betaine transporter n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CK16_ELIME similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 312.0
  • Bit_score: 502
  • Evalue 4.20e-139
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:EOR29704.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 312.0
  • Bit_score: 502
  • Evalue 5.90e-139
choline/carnitine/betaine transporter; K02168 high-affinity choline transport protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 309.0
  • Bit_score: 335
  • Evalue 1.60e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Elizabethkingia meningoseptica → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 939
ATGTTCAATTTCATCTGGATGTCGGTGTTTGGGAACAGTGCAATCTGGTTTGATCAGCACGTTGCAGATGGTGCACTGAGTATGCTTTCCGTCAATCCGGATGCATTGATGTTCCGTTTTCTGGAATATTTTCCGTTCTCCACCATCGTCAGTTTCGTCACCATTGCCATTATCATCATCTTTTTCGTAACGTCTGCCGATTCCGGGATGTTCGTGATGAACAGCATTGCGACCAAAAATGCAAAGGTTTCTCCAAAATGGCAAACGGTCGGCTGGGGCGTTTTATTGGCGGCATTGGCTTTAATGTTACTGAATGCCGGTGGACTAACCGCACTCCAAAGTATGACGCTAATTACGGCGCTTCCGTTTTCGGTAATTATGTTGCTGTTTATTGTGAGTTTGGTGAAGGCGTTATCCATCGATCAAAATTATTACGAACGCGATTTTTCTGCCACCACCATTCCATGGTCGGGAGAATATTGGAAAGACCGCCTGAAGCAAATTGTTTCCTATCACGACAAAAAATCGGTGGATGCGTTTATTCATTCCACCGTACAAGATGCCTTCCACGATTTGCAGCAGGAGTTTTCAAAAAACGGTATTGAAGCCAAAGTACACTCTCACGAAAAACCAGCACGAGTGGAAATTGAGATTAAGTACGATGTGGTAAATAATTTTATTTACGGAGTGAAAAGTGATTCCAAAATAATCTCAGATTATTTGCTGAACGAAGATAATCTTCCGGATGCCGAGAACGATCACAGTTATTTTCCGAAATCGTATTTTGGAGACGATCGCGAAGGATACGATGTGCAATTGTTTACGAAAAATGAATTGATTTCCGACGTCTTGAAACACTACGGACGATTTGTCGAAATTATTTCGGAAAAGAAAAACGAAATGTTCATCAGCAGCAACAGTAATCAAAGGTTTCGGTAG
PROTEIN sequence
Length: 313
MFNFIWMSVFGNSAIWFDQHVADGALSMLSVNPDALMFRFLEYFPFSTIVSFVTIAIIIIFFVTSADSGMFVMNSIATKNAKVSPKWQTVGWGVLLAALALMLLNAGGLTALQSMTLITALPFSVIMLLFIVSLVKALSIDQNYYERDFSATTIPWSGEYWKDRLKQIVSYHDKKSVDAFIHSTVQDAFHDLQQEFSKNGIEAKVHSHEKPARVEIEIKYDVVNNFIYGVKSDSKIISDYLLNEDNLPDAENDHSYFPKSYFGDDREGYDVQLFTKNELISDVLKHYGRFVEIISEKKNEMFISSNSNQRFR*