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SCNpilot_cont_500_bf_scaffold_100

Search features with annotation key words

Displaying items 61-90 of 207 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_100_60
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71247..72527
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI0003732DF8 rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL30829.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
RSp0310; macrolide-efflux transmembrane protein; K08217 MFS transporter, DHA3 family, macrolide efflux protein rbh
SCNpilot_cont_500_bf_scaffold_100_61
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(72590..73213)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037423A9
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:CEN41385.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_100_62
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(73226..75136)
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI00037999CA rbh
Putative Histidine kinase {ECO:0000313|EMBL:CEN36200.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
putative signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_100_63
unknown

Not on your lists

75317..75742
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_100_64
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

75773..76381
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W392_9FLAO
Opacity protein {ECO:0000313|EMBL:KIC62947.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_100_65
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

76442..76906
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029AB3E5
Uncharacterized protein {ECO:0000313|EMBL:KGO08487.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_100_66
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

77149..78288
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000360AE11 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK05119.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
SCNpilot_cont_500_bf_scaffold_100_67
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

78302..81430
DNA (3129bp) protein (1043aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003655A8C rbh
Multidrug transporter AcrB {ECO:0000313|EMBL:KEQ30723.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter rbh
SCNpilot_cont_500_bf_scaffold_100_68
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

81430..82833
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000368349B rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK05121.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
RND efflux system outer membrane lipoprotein
SCNpilot_cont_500_bf_scaffold_100_69
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

82835..83938
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00035F1197 rbh
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACU63512.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_100_70
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

83948..84703
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037FC74C rbh
LytTR family transcriptional regulator {ECO:0000313|EMBL:KIA95024.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
LytTR family two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_100_71
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

84733..85266
DNA (534bp) protein (178aa)
GCN5-related N-acetyltransferase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NK29_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AJQ25659.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
acetyltransferase
SCNpilot_cont_500_bf_scaffold_100_72
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

85500..87821
DNA (2322bp) protein (774aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036554AC rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGO86971.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
TonB-dependent Receptor
SCNpilot_cont_500_bf_scaffold_100_73
unknown

Not on your lists

87833..88333
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_100_74
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

88469..89485
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X274_FLAB3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU08537.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_100_75
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

89656..90579
DNA (924bp) protein (308aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
Malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] rbh
Malate dehydrogenase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X266_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_100_76
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(90664..92787)
DNA (2124bp) protein (708aa)
Tex-like protein N-terminal domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1V4_9FLAO rbh
RNA-binding protein {ECO:0000313|EMBL:KFC22138.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
RNA binding protein with S1 RNA-binding domain; K06959 uncharacterized protein rbh
SCNpilot_cont_500_bf_scaffold_100_trna_5
unknown

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comp(92998..93071)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_100_trna_4
unknown

Not on your lists

comp(93114..93188)
DNA (75bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_100_trna_3
unknown

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comp(93208..93292)
DNA (85bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_100_77
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

93425..94447
DNA (1023bp) protein (341aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K11066 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] rbh
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3P6_FLAB3 rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KIA88856.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_cont_500_bf_scaffold_100_78
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

94568..95962
DNA (1395bp) protein (465aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
aspartate ammonia-lyase (EC:4.3.1.1); K01744 aspartate ammonia-lyase [EC:4.3.1.1] rbh
Aspartate ammonia-lyase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3P7_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_100_79
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

96045..98915
DNA (2871bp) protein (957aa)
M16 family peptidase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3P8_FLAB3 rbh
Peptidase M16 {ECO:0000313|EMBL:KEY20118.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
M16 family peptidase rbh
SCNpilot_cont_500_bf_scaffold_100_80
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(99344..101485)
DNA (2142bp) protein (714aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3Q0_FLAB3 rbh
Peptidase S46 {ECO:0000313|EMBL:KIA83133.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_100_81
unknown

Not on your lists

101542..101655
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_100_82
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

101882..102889
DNA (1008bp) protein (336aa)
Transcriptional regulator, LacI family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1Q2_9FLAO rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFK34263.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
periplasmic binding protein/LacI transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_100_83
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

102925..103839
DNA (915bp) protein (305aa)
ribokinase-like domain-containing protein; K00847 fructokinase [EC:2.7.1.4] rbh
Kinase, PfkB family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1Q1_9FLAO rbh
Ribokinase {ECO:0000313|EMBL:KFC18281.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_500_bf_scaffold_100_84
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

103865..105103
DNA (1239bp) protein (413aa)
L-fucose:H+ symporter permease n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1Q0_9FLAO rbh
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EFK34261.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
L-fucose transporter; K02429 MFS transporter, FHS family, L-fucose permease rbh
SCNpilot_cont_500_bf_scaffold_100_85
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

105151..106500
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1P9_9FLAO rbh
Maltoporin {ECO:0000313|EMBL:CEJ68995.1}; Flags: Precursor;; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein; K02024 maltoporin rbh
SCNpilot_cont_500_bf_scaffold_100_86
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

106625..107464
DNA (840bp) protein (280aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJZ7_9FLAO rbh
Xylose isomerase {ECO:0000313|EMBL:KFC18284.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
D-tagatose 3-epimerase-like rbh
Displaying items 61-90 of 207 in total

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