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SCNpilot_cont_500_bf_scaffold_345_21

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 18863..19420

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1E1_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 185.0
  • Bit_score: 300
  • Evalue 8.40e-79
  • rbh
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KIA89152.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 185.0
  • Bit_score: 304
  • Evalue 8.20e-80
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 185.0
  • Bit_score: 300
  • Evalue 2.70e-79
  • rbh

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Taxonomy

Chryseobacterium jeonii → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGGAAAAATCCGAACTTCTTTCCGTCATCACGCTTGCAAAACAAAAAGATCAGAAAGCGCAAACTAAGCTCATTAACGCATATTGGATCGATGTTTTCAGTTTTGTGATGAAGAAGGTTCAAAATGAGAATGTTGCCGACGAAATCACTGTTTCGGTGTTTTCCAAAGTACTTTCTAAGCTGGAAATGTATGATCCTAATTTTCAGTTCAAAACCTGGATTCTCACCATTGCTCAGAATACCGTTATCGACTATTGGCGAAAAAAATCTCGCGAAAATGAAGATTCCACAGACAATTTTGACGGATTCAAAAACCAATTTGCGCGTTCACCTGAAGAATTGTTGATTTCAGAAGAAGATCAGAAACAAATTCTGGCAGTAATTGCTAGTTTAGATTCCAATTATCAGGATATCATTAGGTTAAGATTTTTTGAAGAGAAAAGCATAAAAGAAATTGCAGAAGAACTACAACTCACCGTTGCCAATACCAAAGTACGCATTATGCGTGCCAAGAAGGTGCTTGCGCAGTTGCTGAAAGCCAATGAATTCAACGATTAA
PROTEIN sequence
Length: 186
MEKSELLSVITLAKQKDQKAQTKLINAYWIDVFSFVMKKVQNENVADEITVSVFSKVLSKLEMYDPNFQFKTWILTIAQNTVIDYWRKKSRENEDSTDNFDGFKNQFARSPEELLISEEDQKQILAVIASLDSNYQDIIRLRFFEEKSIKEIAEELQLTVANTKVRIMRAKKVLAQLLKANEFND*