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SCNpilot_cont_500_bf_scaffold_345

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_345_1
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..567
DNA (567bp) protein (189aa)
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22]
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Asparagine--tRNA ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F9_FLAB3
SCNpilot_cont_500_bf_scaffold_345_2
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

603..2168
DNA (1566bp) protein (522aa)
RNA polymerase sigma-54 factor rpoN n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F8_FLAB3 rbh
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KIA82975.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
RNA polymerase sigma-54 factor rpoN; K03092 RNA polymerase sigma-54 factor rbh
SCNpilot_cont_500_bf_scaffold_345_3
unknown

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comp(2131..2292)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_345_4
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2285..2959)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F7_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08270.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_345_5
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2952..3446)
DNA (495bp) protein (165aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F6_FLAB3
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KEY18868.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_345_6
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3614..4675
DNA (1062bp) protein (354aa)
ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] rbh
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4V0_9FLAO rbh
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:CEJ70967.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
SCNpilot_cont_500_bf_scaffold_345_7
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4815..6533
DNA (1719bp) protein (573aa)
ABC transporter, ATP-binding protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4V1_9FLAO rbh
ABC transporter {ECO:0000313|EMBL:KIC63766.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
ABC transporter rbh
SCNpilot_cont_500_bf_scaffold_345_8
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6596..7174
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F3_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08266.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_345_9
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7171..7818
DNA (648bp) protein (216aa)
Putative HD superfamily hydrolase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN62_9FLAO rbh
Phosphohydrolase {ECO:0000313|EMBL:KIA82979.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
HD domain protein; K06950 uncharacterized protein rbh
SCNpilot_cont_500_bf_scaffold_345_10
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7898..8509
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F1_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA89028.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_345_11
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8528..9724)
DNA (1197bp) protein (399aa)
Membrane fusion efflux protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F0_FLAB3 rbh
Membrane fusion efflux protein; K02005 HlyD family secretion protein rbh
Membrane fusion efflux protein {ECO:0000313|EMBL:ACU08263.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_345_12
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9772..11046)
DNA (1275bp) protein (425aa)
ABC transporter permease protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1E9_FLAB3 rbh
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY18873.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
ABC transporter permease; K02004 putative ABC transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_345_13
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11090..12319)
DNA (1230bp) protein (410aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CMV2_9FLAO rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC63393.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
ABC transporter; K02004 putative ABC transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_345_14
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12347..13039)
DNA (693bp) protein (231aa)
ABC transporter, ATP-binding protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1E7_FLAB3 rbh
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIA82983.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_345_15
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13449..14423
DNA (975bp) protein (325aa)
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] rbh
Ribonucleotide reductase n=3 Tax=Elizabethkingia RepID=H0KQH0_9FLAO rbh
Ribonucleotide reductase {ECO:0000313|EMBL:KIA89022.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_cont_500_bf_scaffold_345_16
unknown

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14622..14738
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_345_17
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14914..16569
DNA (1656bp) protein (552aa)
Ribonucleotide-diphosphate reductase subunit alpha {ECO:0000313|EMBL:EOR30156.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EOR30156.1};; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] rbh
Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CSL1_ELIME rbh
SCNpilot_cont_500_bf_scaffold_345_18
unknown

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comp(16692..17219)
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_345_19
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17568..18452
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CMV0_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF75350.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_345_20
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18459..18755)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1E3_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08256.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_345_21
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18863..19420
DNA (558bp) protein (186aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1E1_FLAB3 rbh
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KIA89152.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_cont_500_bf_scaffold_345_22
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19507..20373
DNA (867bp) protein (289aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
Lipoyl synthase n=3 Tax=Elizabethkingia RepID=H0KNT1_9FLAO rbh
Lipoate synthase rbh
SCNpilot_cont_500_bf_scaffold_345_23
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20383..21630
DNA (1248bp) protein (416aa)
CinA-like protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1D1_FLAB3 rbh
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA rbh
SCNpilot_cont_500_bf_scaffold_345_24
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21703..23781
DNA (2079bp) protein (693aa)
metallopeptidase; K07386 putative endopeptidase [EC:3.4.24.-] rbh
Metallopeptidase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0L4_FLAB3 rbh
Endothelin-converting protein {ECO:0000313|EMBL:KIA89002.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_cont_500_bf_scaffold_345_25
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23976..24806
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W6Z0_9FLAO rbh
Permease {ECO:0000313|EMBL:KFF29456.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein; K07090 rbh
SCNpilot_cont_500_bf_scaffold_345_26
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24803..25186
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W6Y9_9FLAO
Membrane protein {ECO:0000313|EMBL:KFF13610.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_345_27
unknown

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comp(25142..25297)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_345_28
unknown

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comp(25242..25370)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_345_29
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25531..26334)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CD96_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF08012.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_345_30
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26462..27292)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0L7_FLAB3 rbh
Flavin reductase {ECO:0000313|EMBL:KIA88998.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein rbh
Displaying items 1-30 of 119 in total

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