ggKbase home page

SCNpilot_cont_500_bf_scaffold_330

Search features with annotation key words

Displaying items 1-30 of 281 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_330_1
unknown

Not on your lists

2..115
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_330_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112..1098
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003775B66
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:EXG82974.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein; K02025 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_330_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1095..1931
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036DAAF5
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:EXG82975.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_330_4
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1975..3273
DNA (1299bp) protein (433aa)
agaZ; tagatose 6-phosphate kinase; K00917 tagatose 6-phosphate kinase [EC:2.7.1.144]
Tagatose 6-phosphate kinase n=3 Tax=Streptomyces RepID=O50522_STRCO
Tagatose 6-phosphate kinase {ECO:0000313|EMBL:CAA15805.1}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).;"
SCNpilot_cont_500_bf_scaffold_330_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3270..4460
DNA (1191bp) protein (397aa)
AgaS family sugar isomerase; K02082 tagatose-6-phosphate ketose/aldose isomerase [EC:5.-.-.-] rbh
tagatose-6-phosphate ketose isomerase n=1 Tax=Glaciibacter superstes RepID=UPI0003B50909 rbh
Putative phosphosugar isomerase {ECO:0000313|EMBL:EXG82977.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
SCNpilot_cont_500_bf_scaffold_330_6
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4464..5438
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=O50524_STRCO rbh
SC9B10.17; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAA15807.1}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).;"
SCNpilot_cont_500_bf_scaffold_330_7
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5435..6277
DNA (843bp) protein (281aa)
ketose-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] rbh
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:ABS03641.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ABS03641.1};; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Ketose-bisphosphate aldolase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WA02_KINRD rbh
SCNpilot_cont_500_bf_scaffold_330_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6280..6888)
DNA (609bp) protein (203aa)
alkylhydroperoxidase n=1 Tax=Glaciibacter superstes RepID=UPI0003B5E323
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:KJL24574.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
peroxidase-like protein
SCNpilot_cont_500_bf_scaffold_330_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6890..7474)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RDQ8_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:KJL24575.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_330_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7467..8483)
DNA (1017bp) protein (339aa)
Alkanal monooxygenase alpha chain {ECO:0000313|EMBL:KJL24576.1}; EC=1.14.14.3 {ECO:0000313|EMBL:KJL24576.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Luciferase-like monooxygenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RXY0_LEIAQ
Alkanal monooxygenase (Bacterial liciferase alpha chain) like protein
SCNpilot_cont_500_bf_scaffold_330_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8480..9208)
DNA (729bp) protein (243aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7D6_LEIAQ
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK73383.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
branched-chain amino acid ABC transporter
SCNpilot_cont_500_bf_scaffold_330_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9205..10056)
DNA (852bp) protein (284aa)
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:KJL24578.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL24578.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003828926
branched-chain amino acid ABC transporter
SCNpilot_cont_500_bf_scaffold_330_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10053..11855)
DNA (1803bp) protein (601aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RXB2_LEIAQ
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ERK73381.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_330_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11862..13022)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037ED2EE rbh
Ligand-binding protein, receptor family {ECO:0000313|EMBL:ERK73380.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
branched-chain amino acid transport system substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_330_15
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13461..14384)
DNA (924bp) protein (308aa)
Uncharacterized protein id=7720648 bin=CNBR_ACT species=Kineococcus radiotolerans genus=Kineococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS05318.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_500_bf_scaffold_330_16
Equid herpesvirus 1, Varicellovirus, Herpesvirales, Viruses

Not on your lists

comp(14492..14989)
DNA (498bp) protein (166aa)
Membrane glycoprotein n=1 Tax=Equid herpesvirus 1 RepID=O39781_9ALPH
Membrane glycoprotein {ECO:0000313|EMBL:BAA20037.1}; TaxID=10326 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.;" source="Equid herpesvirus 1 (Equine herpesvirus 1).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_330_17
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15100..15483)
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BRN1_XYLCX
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACZ32297.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_500_bf_scaffold_330_18
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15561..16364)
DNA (804bp) protein (268aa)
Methylase n=1 Tax=Streptomyces sp. Mg1 RepID=B4VBQ7_9ACTO rbh
Methylase {ECO:0000313|EMBL:EDX25387.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
methylase of polypeptide chain release factors
SCNpilot_cont_500_bf_scaffold_330_trna_5
unknown

Not on your lists

comp(16581..16654)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_330_19
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16748..17830)
DNA (1083bp) protein (361aa)
dihydroxyacetone kinase, DhaK subunit (EC:2.7.1.29); K05878 dihydroxyacetone kinase, N-terminal domain [EC:2.7.1.-]
dihydroxyacetone kinase n=1 Tax=Glaciibacter superstes RepID=UPI0003B4B9F6 rbh
Contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89902.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SCNpilot_cont_500_bf_scaffold_330_20
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17830..18456)
DNA (627bp) protein (209aa)
dihydroxyacetone kinase, L subunit; K05879 dihydroxyacetone kinase, C-terminal domain [EC:2.7.1.-]
Dihydroxyacetone kinase, L subunit n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BTV7_XYLCX
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:ACZ29121.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_500_bf_scaffold_330_21
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18481..19272)
DNA (792bp) protein (264aa)
haloacid dehalogenase n=1 Tax=Glaciibacter superstes RepID=UPI0003B77F7F rbh
Contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89901.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
HAD-superfamily hydrolase rbh
SCNpilot_cont_500_bf_scaffold_330_22
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19269..20153)
DNA (885bp) protein (295aa)
ketose-bisphosphate aldolase (EC:4.1.2.40)
Ketose-bisphosphate aldolase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDU2_NAKMY
Contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89900.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SCNpilot_cont_500_bf_scaffold_330_23
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20218..21501)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J8Z9_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EOT28757.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
transaldolase 1 rbh
SCNpilot_cont_500_bf_scaffold_330_24
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21571..22305
DNA (735bp) protein (245aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XQG4_PROPF
Contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89899.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
UbiC transcription regulator-associated domain protein
SCNpilot_cont_500_bf_scaffold_330_25
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22331..23329)
DNA (999bp) protein (333aa)
LacI family transcriptional regulator (EC:5.1.1.1); K02529 LacI family transcriptional regulator rbh
LacI family transcription regulator n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B66644 rbh
Putative LacI family transcriptional regulator {ECO:0000313|EMBL:GAB12088.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
SCNpilot_cont_500_bf_scaffold_330_26
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23639..24574
DNA (936bp) protein (312aa)
cysteine synthase A; K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
cysteine synthase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00031E4E8E
SCNpilot_cont_500_bf_scaffold_330_27
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24576..25154
DNA (579bp) protein (193aa)
serine O-acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Serine acetyltransferase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A0K2_CELGA
SCNpilot_cont_500_bf_scaffold_330_28
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25214..26230
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCH1_CELFN
Uncharacterized protein {ECO:0000313|EMBL:KGM17412.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_330_29
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26264..27535
DNA (1272bp) protein (424aa)
GCN5-related protein N-acetyltransferase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H5U7_CELFA rbh
GCN5-like N-acetyltransferase rbh
GCN5-related protein N-acetyltransferase {ECO:0000313|EMBL:AEE45547.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Displaying items 1-30 of 281 in total

View Taxonomy