name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_246_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..523)
|
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
F0F1 ATP synthase subunit beta n=1 Tax=Methylocystis parvus RepID=UPI0002F4FF82
ATP synthase F1 subunit beta
|
|
SCNpilot_cont_500_bf_scaffold_246_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(548..1432)
|
F0F1 ATP synthase subunit gamma n=1 Tax=Methylocystis parvus RepID=UPI0002DFA03A
rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
atpG; F1 ATP synthase subunit gamma
rbh
|
|
SCNpilot_cont_500_bf_scaffold_246_3
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1512..3041)
|
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346, ECO:0000313|EMBL:CCJ08783.1}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
F0F1 ATP synthase subunit alpha n=1 Tax=Methylocystis parvus RepID=UPI0002D5E34E
rbh
ATP synthase subunit alpha
rbh
|
|
SCNpilot_cont_500_bf_scaffold_246_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3041..3604)
|
F0F1 ATP synthase subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035F0DAE
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_cont_500_bf_scaffold_246_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4095..5558
|
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:BAK65436.1}; EC=1.2.1.- {ECO:0000313|EMBL:BAK65436.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
NAD-dependent aldehyde dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMY8_9SPHN
rbh
NAD-dependent aldehyde dehydrogenase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_246_6
unknown
|
Not on your lists |
5981..6655
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_246_7
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6677..8941)
|
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037C56BC
rbh
primosomal protein N'
rbh
|
|
SCNpilot_cont_500_bf_scaffold_246_8
uncultured bacterium, Bacteria
|
Not on your lists |
comp(8991..9977)
|
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DN16_BRAJP
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:BAP28539.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
SCNpilot_cont_500_bf_scaffold_246_9
uncultured bacterium, Bacteria
|
Not on your lists |
comp(9974..11068)
|
Glycerol-3-phosphate dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJX3_9BRAD
Putative opine dehydrogenase {ECO:0000313|EMBL:BAP28540.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
SCNpilot_cont_500_bf_scaffold_246_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11115..12257)
|
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNH3_BRAJP
Strain MEJ076 contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ03703.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
ABC transporter substrate-binding protein
|
|
SCNpilot_cont_500_bf_scaffold_246_11
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12770..13480)
|
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
Uroporphyrinogen III synthase HEM4 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EJI7_METSB
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:ACK48990.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
|
|
SCNpilot_cont_500_bf_scaffold_246_12
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13484..14398)
|
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Porphobilinogen deaminase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IAW6_BEII9
rbh
|
|
SCNpilot_cont_500_bf_scaffold_246_13
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14539..15597
|
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
rbh
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=395963 species="Bacteria; Proteobacteria; Alphapro
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IAW5_BEII9
rbh
|
|
SCNpilot_cont_500_bf_scaffold_246_14
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15599..16222
|
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QUK5_METTR
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein {ECO:0000313|EMBL:CCJ05752.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
|
|
SCNpilot_cont_500_bf_scaffold_246_15
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16219..17232
|
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
rbh
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394, ECO:0000313|EMBL:CCJ05751.1};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037ADFE3
rbh
|
|
SCNpilot_cont_500_bf_scaffold_246_16
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17320..17733
|
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ESK5_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK49895.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
|
|
SCNpilot_cont_500_bf_scaffold_246_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17730..18131)
|
mutT; mutator protein mutT; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
NUDIX hydrolase n=3 Tax=Rhodopseudomonas palustris RepID=B3QBK3_RHOPT
Putative mutator protein mutT {ECO:0000313|EMBL:CAE26038.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
|
|
SCNpilot_cont_500_bf_scaffold_246_18
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18128..18649)
|
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035DBA49
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CCJ08372.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
|
|
SCNpilot_cont_500_bf_scaffold_246_19
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18723..19496)
|
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000377D6CC
Uncharacterized protein {ECO:0000313|EMBL:KJS20524.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_246_20
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19687..20601)
|
Porin opacity type n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QUI3_METTR
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ44751.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_246_21
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20766..22130)
|
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
glmM; phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10]
Phosphoglucosamine mutase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CJD9_9RHIZ
|
|
SCNpilot_cont_500_bf_scaffold_246_22
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22304..22654
|
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
Arsenate reductase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YSV2_9PROT
arsenate reductase
|
|
SCNpilot_cont_500_bf_scaffold_246_23
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22714..24306
|
AMP-dependent synthetase and ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00036F7AF0
rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
|
|
SCNpilot_cont_500_bf_scaffold_246_24
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24303..24929
|
2-hydroxychromene-2-carboxylate isomerase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JJV3_9BURK
2-hydroxychromene-2-carboxylate isomerase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
|
|
SCNpilot_cont_500_bf_scaffold_246_25
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24933..25910)
|
Exported protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJE1_9BURK
rbh
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
|
|
SCNpilot_cont_500_bf_scaffold_246_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26035..27954)
|
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cell division protein FtsH n=1 Tax=Methyloferula stellata RepID=UPI0003742537
|
|
SCNpilot_cont_500_bf_scaffold_246_27
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28132..29052)
|
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
tRNA(Ile)-lysidine synthase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QX85_METTR
|
|
SCNpilot_cont_500_bf_scaffold_246_28
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29147..30241)
|
Tol-pal system protein YbgF n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ER04_METSB
tol-pal system protein YbgF
Tol-pal system protein YbgF {ECO:0000313|EMBL:ACK49749.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
|
|
SCNpilot_cont_500_bf_scaffold_246_29
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30504..31004)
|
Peptidoglycan-associated lipoprotein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QPB9_METTR
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:ACB96957.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
|
|
SCNpilot_cont_500_bf_scaffold_246_30
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31400..32185
|
Iron permease FTR1 n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WU70_9RHIZ
Iron permease FTR1 {ECO:0000313|EMBL:EIZ83953.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
iron permease FTR1; K07243 high-affinity iron transporter
|