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SCNpilot_cont_500_bf_scaffold_622

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_622_1
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1226
DNA (1224bp) protein (408aa)
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] rbh
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
seryl-tRNA synthetase n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036D97D0 rbh
SCNpilot_cont_500_bf_scaffold_622_2
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1663..2343
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003709B47
porin
Porin {ECO:0000313|EMBL:ACK49859.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_622_3
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2508..3272
DNA (765bp) protein (255aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
stationary-phase survival protein SurE (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031AD7BF
SCNpilot_cont_500_bf_scaffold_622_4
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3294..3977
DNA (684bp) protein (228aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:ACK50307.1}; EC=2.1.1.77 {ECO:0000313|EMBL:ACK50307.1};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ERC3_METSB
SCNpilot_cont_500_bf_scaffold_622_5
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4209..5414
DNA (1206bp) protein (402aa)
peptidase M23 n=1 Tax=Methylocystis rosea RepID=UPI00037F49D6
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:CCJ05522.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_500_bf_scaffold_622_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5549..6490
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QBC5_RHOPT
DMT family permease
Uncharacterized protein {ECO:0000313|EMBL:ACE99078.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_500_bf_scaffold_622_7
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6494..7321)
DNA (828bp) protein (276aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100) rbh
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WZN7_DELAC rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KHQ97382.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_500_bf_scaffold_622_8
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7318..8286)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XVC5_RHIRD rbh
MarR family transcriptional regulator with acetyltransferase activity rbh
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCNpilot_cont_500_bf_scaffold_622_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8367..8918)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F0882
Uncharacterized protein {ECO:0000313|EMBL:KDP76159.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_622_10
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9012..9647
DNA (636bp) protein (212aa)
TetR family transcriptional regulator n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BVF2_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:KDP76158.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_622_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9644..10522)
DNA (879bp) protein (293aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX22_9RHIZ rbh
ATPase AAA {ECO:0000313|EMBL:KFG68792.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein; K06923 rbh
SCNpilot_cont_500_bf_scaffold_622_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10728..11057
DNA (330bp) protein (110aa)
Preprotein translocase subunit YajC n=1 Tax=Rhodovulum sp. PH10 RepID=J5PPC1_9RHOB
Preprotein translocase subunit YajC {ECO:0000313|EMBL:EJW12187.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Preprotein translocase, YajC subunit; K03210 preprotein translocase subunit YajC
SCNpilot_cont_500_bf_scaffold_622_13
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11096..12628
DNA (1533bp) protein (511aa)
preprotein translocase subunit SecD n=1 Tax=Methyloferula stellata RepID=UPI0003698F1B
protein-export membrane protein, SecD rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_500_bf_scaffold_622_14
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12645..13574
DNA (930bp) protein (310aa)
Protein-export membrane protein SecF n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2II62_BEII9 rbh
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_622_15
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13647..14033
DNA (387bp) protein (129aa)
membrane protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034677B3
hypothetical protein; K09008 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX26842.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_cont_500_bf_scaffold_622_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14058..14912
DNA (855bp) protein (285aa)
squalene/phytoene synthase; K02291 phytoene synthase [EC:2.5.1.32]
Phytoene/squalene synthetase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX28_9RHIZ
Phytoene/squalene synthetase {ECO:0000313|EMBL:EIM28520.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_500_bf_scaffold_622_17
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14845..15888)
DNA (1044bp) protein (348aa)
Methyltransferase type 11 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6F6_9BRAD rbh
Methyltransferase type 11 {ECO:0000313|EMBL:ETR77468.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_622_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16205..17533)
DNA (1329bp) protein (443aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp.
hypothetical protein (EC:2.1.1.74); K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VHR5_RHOPX
SCNpilot_cont_500_bf_scaffold_622_19
unknown

Not on your lists

comp(17791..18024)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_622_20
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18296..18577)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EM61_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK51450.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_622_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18763..20400
DNA (1638bp) protein (546aa)
acyl-CoA synthetase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Putative AMP-binding enzyme n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T781_9BRAD
Acyl-CoA synthetase {ECO:0000313|EMBL:ETR75141.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_500_bf_scaffold_622_22
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20592..21551)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2JKJ0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EUC01320.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
bug13; hypothetical protein
SCNpilot_cont_500_bf_scaffold_622_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21710..23131
DNA (1422bp) protein (474aa)
MmgE/PrpD family protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9X2_STAND rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC73061.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MmgE/PrpD family protein rbh
SCNpilot_cont_500_bf_scaffold_622_24
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23225..24457
DNA (1233bp) protein (411aa)
(S)-mandelate dehydrogenase n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FBA0_9ALTE
L-lactate dehydrogenase {ECO:0000313|EMBL:ETR78167.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
mdlB; (S)-mandelate dehydrogenase
SCNpilot_cont_500_bf_scaffold_622_25
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24565..26280
DNA (1716bp) protein (572aa)
Thiamine pyrophosphate enzyme-like TPP-binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11E79_MESSB rbh
acetolactate synthase catalytic subunit rbh
Thiamine pyrophosphate enzyme-like TPP-binding protein {ECO:0000313|EMBL:ABG64296.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_622_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26538..27821
DNA (1284bp) protein (428aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VDM1_9ACTO
Amidohydrolase {ECO:0000313|EMBL:KJL34725.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
amidohydrolase 2
SCNpilot_cont_500_bf_scaffold_622_27
unknown

Not on your lists

27824..28117
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_622_28
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28170..28538
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036A8900
Nitrite reductase {ECO:0000313|EMBL:KEI44575.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
Rieske (2Fe-2S) iron-sulfur domain-containing protein
SCNpilot_cont_500_bf_scaffold_622_29
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(28717..29655)
DNA (939bp) protein (313aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A250_DEIPD
oxidoreductase, aryl-alcohol dehydrogenase like protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_cont_500_bf_scaffold_622_30
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29828..30598
DNA (771bp) protein (257aa)
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-] rbh
Silent information regulator protein Sir2 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IBA1_BEII9 rbh
Silent information regulator protein Sir2 {ECO:0000313|EMBL:ACB95185.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Displaying items 1-30 of 56 in total

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