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SCNpilot_cont_500_bf_scaffold_125

Search features with annotation key words

Displaying items 121-150 of 298 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_125_121
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148777..151449
DNA (2673bp) protein (891aa)
Aminopeptidase N n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGL5_9GAMM
Aminopeptidase N {ECO:0000313|EMBL:EIL98606.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aminopeptidase N
SCNpilot_cont_500_bf_scaffold_125_122
Anopheles darlingi, Anopheles, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

151531..152379
DNA (849bp) protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:ETN61665.1, ECO:0000313|EnsemblMetazoa:ADAC006673-PA}; TaxID=43151 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles.;" source="Anopheles darlingi (Mosquito).;"
SCNpilot_cont_500_bf_scaffold_125_123
unknown

Not on your lists

comp(152498..152698)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_125_124
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153350..155287
DNA (1938bp) protein (646aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA12_9GAMM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glucose-inhibited division protein A
SCNpilot_cont_500_bf_scaffold_125_125
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155490..157562
DNA (2073bp) protein (691aa)
Phospholipase/lecithinase/hemolysin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQP6_9GAMM
Transporter {ECO:0000313|EMBL:AHX15413.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
phospholipase/lecithinase/hemolysin
SCNpilot_cont_500_bf_scaffold_125_126
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157629..158495)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003469A0C
Uncharacterized protein {ECO:0000313|EMBL:KJV36678.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_125_127
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158919..161750
DNA (2832bp) protein (944aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364D8D6 rbh
TonB-denpendent receptor {ECO:0000313|EMBL:GAN45742.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
outer membrane receptor for ferrienterochelin and colicins
SCNpilot_cont_500_bf_scaffold_125_128
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161876..163432)
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037816EA rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN45743.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
TPR-repeat-containing protein
SCNpilot_cont_500_bf_scaffold_125_129
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163429..164907)
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037816EA
Uncharacterized protein {ECO:0000313|EMBL:GAN45743.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
TPR-repeat-containing protein
SCNpilot_cont_500_bf_scaffold_125_130
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165460..168348
DNA (2889bp) protein (963aa)
Tonb-dependent outer membrane receptor protein n=2 Tax=mine drainage metagenome RepID=T1D7G9_9ZZZZ rbh
TonB-denpendent receptor {ECO:0000313|EMBL:GAN45742.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_125_131
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168523..170112)
DNA (1590bp) protein (530aa)
TPR repeat-containing protein n=3 Tax=mine drainage metagenome RepID=T1D9S9_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN45743.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
TPR-repeat-containing protein rbh
SCNpilot_cont_500_bf_scaffold_125_132
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170109..171686)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037816EA
Uncharacterized protein {ECO:0000313|EMBL:GAN45743.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_125_133
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171686..173887)
DNA (2202bp) protein (734aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
glycyl-tRNA synthetase beta chain (EC:6.1.1.14)
glycyl-tRNA synthetase subunit beta n=1 Tax=Dyella japonica RepID=UPI000308622B
SCNpilot_cont_500_bf_scaffold_125_134
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173880..174770)
DNA (891bp) protein (297aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
Glycyl-tRNA synthetase subunit alpha n=1 Tax=mine drainage metagenome RepID=T1ADX3_9ZZZZ
SCNpilot_cont_500_bf_scaffold_125_135
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174873..176672
DNA (1800bp) protein (600aa)
type II secretion system protein E n=1 Tax=Dyella japonica RepID=UPI0002D2823A
Type II secretion system protein E {ECO:0000313|EMBL:GAN45746.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
SCNpilot_cont_500_bf_scaffold_125_136
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176686..177303)
DNA (618bp) protein (206aa)
Methionine-R-sulfoxide reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPU2_9GAMM
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EIL89233.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
methionine-R-sulfoxide reductase
SCNpilot_cont_500_bf_scaffold_125_137
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177336..179063)
DNA (1728bp) protein (576aa)
Redoxin domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPU1_9GAMM
Redoxin domain-containing protein {ECO:0000313|EMBL:EIL89232.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c biogenesis protein
SCNpilot_cont_500_bf_scaffold_125_138
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179205..179849
DNA (645bp) protein (215aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUA5_9GAMM
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIM03047.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA polymerase, sigma subunit, ECF family
SCNpilot_cont_500_bf_scaffold_125_139
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179854..180507
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJD6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87327.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_125_140
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180606..180902
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003479EAA
pentapeptide MXKDX repeat protein
Pentapeptide MXKDX repeat protein {ECO:0000313|EMBL:AGG88299.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_125_141
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181020..182720)
DNA (1701bp) protein (567aa)
Peptidase M28 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYH2_9GAMM
Peptidase M28 {ECO:0000313|EMBL:EIL92263.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative aminopeptidase
SCNpilot_cont_500_bf_scaffold_125_142
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182916..183740
DNA (825bp) protein (275aa)
GMP synthase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ31_9GAMM
Glutamine amidotransferase {ECO:0000313|EMBL:GAN45747.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
GMP synthase family protein
SCNpilot_cont_500_bf_scaffold_125_143
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183747..184427)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA23_9GAMM
Membrane protein {ECO:0000313|EMBL:GAN45750.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_125_144
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

184592..185977
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00035D07F2
FAD linked oxidase
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADB50831.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_500_bf_scaffold_125_145
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(185935..188463)
DNA (2529bp) protein (843aa)
LuxR family transcriptional regulator n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WXT6_9NOCA
LuxR family transcriptional regulator {ECO:0000313|EMBL:EME16478.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
protein kinase
SCNpilot_cont_500_bf_scaffold_125_146
unknown

Not on your lists

188625..189302
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035F242B
SCNpilot_cont_500_bf_scaffold_125_147
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189350..190561)
DNA (1212bp) protein (404aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
tyrosyl-tRNA synthetase n=1 Tax=Dyella ginsengisoli RepID=UPI0003478AE3
SCNpilot_cont_500_bf_scaffold_125_148
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190767..192227
DNA (1461bp) protein (487aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLH4_9GAMM
Peptidase M23 {ECO:0000313|EMBL:GAN45193.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
metalloendopeptidase-like membrane protein
SCNpilot_cont_500_bf_scaffold_125_149

Not on your lists

192238..193353
DNA (1116bp) protein (372aa)
Anhydro-N-acetylmuramic acid kinase n=2 Tax=mine drainage metagenome RepID=T0YUG1_9ZZZZ rbh
Anhydro-N-acetylmuramic acid kinase {ECO:0000313|EMBL:EQD39241.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
molecular chaperone
SCNpilot_cont_500_bf_scaffold_125_150
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193335..194657)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00035E39AB rbh
Major Facilitator Superfamily transporter rbh
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:AGG90899.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 121-150 of 298 in total

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