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SCNpilot_cont_500_bf_scaffold_125_138

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 52 / 55 BSCG 49 / 51 ASCG 11 / 38
Location: 179205..179849

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUA5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 185.0
  • Bit_score: 285
  • Evalue 4.20e-74
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIM03047.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 185.0
  • Bit_score: 285
  • Evalue 6.00e-74
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 195.0
  • Bit_score: 276
  • Evalue 6.20e-72

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGAGCGCAGGCATTGCAGCGGTGTTTTATGATGTCCCTTTCCTGCCGGATTGCCGCGCCCACGTGTCAGCCGAACCCGCCAGTGCCAGCGAGCAGGCCGACCAGCAACGCAGGGCGTGGATGGCCGCCGCGCAAGCCGGCGATCGGCAAGCCTACGAGCGCGTGCTGGCCGATTCGGTGGCGTTGATCCGCGGCGTGGCGCGACGCCGGGGCGTGCCGGTCGACGCACAGGACGACGTGGTACAGGAAACCCTGATCACCGTGCATCGGGCCCGCCACACCTACGATCCCTCGCGTTCCTACGACGCCTGGCTGGCGGCGATCGCCAGCCGCCGTGCCATCGACACGTTGCGCAGCCACGGTCGCCGCAGCAGCCGCGAGGTGCATGACGACTACGCGCTCGATCGGCATCCGGACCGTGACGATGCCAGCGTCGAGAGCGAACGCGCACAGCGTGCGCAACGTCTGCAGGCTGCCATCGCGGAACTGCCGCCGCGCCAGCGTGAGGCGGTACGGCAACTCGGCCTCAAGGAACAATCGCTGGCAGAAGCCGCTGCCGATACCGGCCGCAATGCGGGCGCCTTGAAGGTGAACCTGCACCGCGCGCTGAAGGCGCTGCGCGAACGTTTGCATGGAGAGCCGTAA
PROTEIN sequence
Length: 215
VSAGIAAVFYDVPFLPDCRAHVSAEPASASEQADQQRRAWMAAAQAGDRQAYERVLADSVALIRGVARRRGVPVDAQDDVVQETLITVHRARHTYDPSRSYDAWLAAIASRRAIDTLRSHGRRSSREVHDDYALDRHPDRDDASVESERAQRAQRLQAAIAELPPRQREAVRQLGLKEQSLAEAAADTGRNAGALKVNLHRALKALRERLHGEP*