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SCNpilot_cont_500_bf_scaffold_136

Search features with annotation key words

Displaying items 121-150 of 953 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_136_119
unknown

Not on your lists

comp(138890..139606)
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_136_120
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139969..140799)
DNA (831bp) protein (277aa)
(protein release factor)-glutamine N5-methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacte
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365FBF1 rbh
SCNpilot_cont_500_bf_scaffold_136_121
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140802..144965)
DNA (4164bp) protein (1388aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKK6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90305.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_136_122
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145076..147820)
DNA (2745bp) protein (915aa)
Aminopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJC5_9GAMM
Aminopeptidase N {ECO:0000313|EMBL:KGI76995.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
aminopeptidase N
SCNpilot_cont_500_bf_scaffold_136_123
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148026..150365
DNA (2340bp) protein (780aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZX5_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL92766.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
TonB-dependent receptor, plug
SCNpilot_cont_500_bf_scaffold_136_124
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150502..152529
DNA (2028bp) protein (676aa)
Beta-lactamase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W931_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL95972.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
beta-lactamase rbh
SCNpilot_cont_500_bf_scaffold_136_125
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

152534..153904
DNA (1371bp) protein (457aa)
Amino acid permease-associated region n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WR04_ALIAD rbh
amino acid permease rbh
Amino acid permease-associated region {ECO:0000313|EMBL:ACV59173.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC; 27009 / DSM 446 / JCM 5260 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 /; 104-1A) (Bacillus acidocaldarius).;"
SCNpilot_cont_500_bf_scaffold_136_126
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153901..155874
DNA (1974bp) protein (658aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3M0_9GAMM rbh
Beta-lactamase {ECO:0000313|EMBL:EIL94061.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
beta-lactamase
SCNpilot_cont_500_bf_scaffold_136_127
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155919..156935
DNA (1017bp) protein (339aa)
Mandelate racemase/muconate lactonizing enzyme n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3L9_9GAMM rbh
Mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:EIL94060.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
mandelate racemase/muconate lactonizing enzyme
SCNpilot_cont_500_bf_scaffold_136_128
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156973..157902
DNA (930bp) protein (310aa)
RpiR family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZX1_9GAMM
RpiR family transcriptional regulator {ECO:0000313|EMBL:EIL92762.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_136_129
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157906..158469)
DNA (564bp) protein (188aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|HAMAP-Rule:MF_01676, ECO:0000256|SAAS:SAAS00087942}; EC=1.11.1.15 {ECO:0000256|HAMAP-Rule:MF_01676, ECO:0000256|SAAS:SAAS00087930};; Alkylhydroperoxidase AhpD {ECO:0000256|HAMAP-Rule:MF_01676}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
alkylhydroperoxidase, AhpD protein (EC:1.11.1.-); K04756 alkyl hydroperoxide reductase subunit D
alkyl hydroperoxide reductase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5579A
SCNpilot_cont_500_bf_scaffold_136_130
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158571..159110)
DNA (540bp) protein (180aa)
alkyl hydroperoxide reductase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3EB49
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KGI77138.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ahpC; alkyl hydroperoxide reductase, peroxiredoxin
SCNpilot_cont_500_bf_scaffold_136_131
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159274..160251
DNA (978bp) protein (326aa)
LysR family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI000364D98A
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL92081.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_136_132
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160253..160666
DNA (414bp) protein (138aa)
GreA/GreB family elongation factor id=2643717 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
transcription elongation factor
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_cont_500_bf_scaffold_136_133
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160944..161363
DNA (420bp) protein (140aa)
Rubrerythrin n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7P8_9GAMM
Rubrerythrin {ECO:0000313|EMBL:EIL95489.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
rubrerythrin
SCNpilot_cont_500_bf_scaffold_136_134
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161542..162885
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7P9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95490.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Fe-S oxidoreductase
SCNpilot_cont_500_bf_scaffold_136_135

Not on your lists

163051..163632
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1CLB4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD68719.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Protein of unknown function (DUF3501)
SCNpilot_cont_500_bf_scaffold_136_136
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163637..164296)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJI8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87379.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_136_137
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164373..164798)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F2BDE
N-acetyltransferase GCN5
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_500_bf_scaffold_136_138
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164974..166419)
DNA (1446bp) protein (482aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K1_9GAMM
Peptidase M20 {ECO:0000313|EMBL:AHX12376.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
SCNpilot_cont_500_bf_scaffold_136_139
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166620..166937
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A6301
Competence protein ComEA-like protein {ECO:0000313|EMBL:EIL94741.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
competence protein ComEA-like protein with helix-hairpin-helix repeat region
SCNpilot_cont_500_bf_scaffold_136_140
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166952..167491
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W530_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45919.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_136_141

Not on your lists

167526..168092
DNA (567bp) protein (189aa)
HutD n=1 Tax=mine drainage metagenome RepID=T0ZNJ3_9ZZZZ
HutD {ECO:0000313|EMBL:EQD46042.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein; K09975 hypothetical protein
SCNpilot_cont_500_bf_scaffold_136_142
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168124..168798
DNA (675bp) protein (225aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6H7_FRAAD
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; K02483 two-component system, OmpR family, response regulator
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AFC85966.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_cont_500_bf_scaffold_136_143
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168788..170176
DNA (1389bp) protein (463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Sensor histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5I9_9GAMM
signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_136_144
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170248..170568)
DNA (321bp) protein (107aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WLV7_9GAMM
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:EIM00449.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
SCNpilot_cont_500_bf_scaffold_136_145
unknown

Not on your lists

comp(170558..171205)
DNA (648bp) protein (216aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_136_146
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171208..171786)
DNA (579bp) protein (193aa)
Putative acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKC9_9GAMM
putative acyltransferase
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_500_bf_scaffold_136_147
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171783..173174)
DNA (1392bp) protein (464aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cysteine desulfurase-like protein, SufS subfamily (EC:2.8.1.7)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003654728
SCNpilot_cont_500_bf_scaffold_136_148
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173171..174490)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348C554
FeS assembly protein SufD {ECO:0000313|EMBL:EIL97835.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Iron-regulated ABC transporter permease protein SufD
Displaying items 121-150 of 953 in total

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