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SCNpilot_cont_500_bf_scaffold_136

Search features with annotation key words

Displaying items 1-30 of 953 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_136_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213..1409
DNA (1197bp) protein (399aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGI78302.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KGI78302.1};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTD7_9GAMM
acetyl-CoA acetyltransferase
SCNpilot_cont_500_bf_scaffold_136_2
unknown

Not on your lists

1414..2124
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_136_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2438..3424)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003745973
Uncharacterized protein {ECO:0000313|EMBL:GAO40748.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
beta-lactamase
SCNpilot_cont_500_bf_scaffold_136_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3640..4149)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTU6_PSEUU
hypothetical protein; K09793 hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV27595.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_500_bf_scaffold_136_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4305..6239)
DNA (1935bp) protein (645aa)
Enterotoxin n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDB5_9GAMM
Enterotoxin {ECO:0000313|EMBL:EIL97456.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
enterotoxin
SCNpilot_cont_500_bf_scaffold_136_6
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6390..7163)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0S3G6_MYCXE
Uncharacterized protein {ECO:0000313|EMBL:KEZ76144.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_136_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7237..7731)
DNA (495bp) protein (165aa)
cupin n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000362924F
Germin-like protein subfamily 2 member 2
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCNpilot_cont_500_bf_scaffold_136_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7942..9378)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z1_9GAMM rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_136_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9499..12279)
DNA (2781bp) protein (927aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] rbh
Serine/threonine protein kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z0_9GAMM
Serine/threonine protein kinase {ECO:0000313|EMBL:EIL95231.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_136_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12340..12870)
DNA (531bp) protein (177aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Y9_9GAMM
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL95230.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_cont_500_bf_scaffold_136_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13089..14312)
DNA (1224bp) protein (408aa)
FAD-dependent oxidoreductase n=1 Tax=Dyella ginsengisoli RepID=UPI0003459C8A
glycine/D-amino acid oxidase, deaminating
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_136_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14457..15302)
DNA (846bp) protein (282aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Dyella japonica RepID=UPI000311B483
SCNpilot_cont_500_bf_scaffold_136_13
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15520..17427)
DNA (1908bp) protein (636aa)
multidrug MFS transporter n=1 Tax=Dyella ginsengisoli RepID=UPI0003497344
Multidrug MFS transporter {ECO:0000313|EMBL:KJV33147.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
putative nucleoside-diphosphate sugar epimerase
SCNpilot_cont_500_bf_scaffold_136_14
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17414..18478)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003483E59
Uncharacterized protein {ECO:0000313|EMBL:KGI78213.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
SCNpilot_cont_500_bf_scaffold_136_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18480..19667)
DNA (1188bp) protein (396aa)
Tetratricopeptide repeat protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7U1_9GAMM
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative N-acetylglucosaminyl transferase
SCNpilot_cont_500_bf_scaffold_136_16
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19788..20084)
DNA (297bp) protein (99aa)
transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI0003499407
integration host factor subunit beta; K05788 integration host factor subunit beta
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_cont_500_bf_scaffold_136_17
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20213..21889)
DNA (1677bp) protein (559aa)
30S ribosomal protein S1 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B2D25 rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 rbh
SCNpilot_cont_500_bf_scaffold_136_18
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22027..22710)
DNA (684bp) protein (228aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Cytidylate kinase n=2 Tax=mine drainage metagenome RepID=T0ZBV9_9ZZZZ
cytidylate kinase
SCNpilot_cont_500_bf_scaffold_136_19
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22741..24051)
DNA (1311bp) protein (437aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Dyella japonica RepID=UPI0002D43239
SCNpilot_cont_500_bf_scaffold_136_20
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24048..25187)
DNA (1140bp) protein (380aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
histidinol-phosphate aminotransferase (EC:2.6.1.-); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
histidinol-phosphate aminotransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B475DD rbh
SCNpilot_cont_500_bf_scaffold_136_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25180..26265)
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphoserine aminotransferase apoenzyme (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VZ24_9GAMM
SCNpilot_cont_500_bf_scaffold_136_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26431..27180)
DNA (750bp) protein (250aa)
FHA domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEV6_9GAMM
FHA domain-containing protein {ECO:0000313|EMBL:EIL97997.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
FHA domain-containing protein
SCNpilot_cont_500_bf_scaffold_136_23

Not on your lists

27214..27522
DNA (309bp) protein (103aa)
Putative polyhydroxyalkanoic acid system protein n=2 Tax=mine drainage metagenome RepID=T0ZK36_9ZZZZ
Putative polyhydroxyalkanoic acid system protein {ECO:0000313|EMBL:EQD30175.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_cont_500_bf_scaffold_136_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27598..27837
DNA (240bp) protein (80aa)
translation initiation factor IF-1 n=1 Tax=Dyella japonica RepID=UPI0002FDA47B
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
translation initiation factor IF-1; K02518 translation initiation factor IF-1
SCNpilot_cont_500_bf_scaffold_136_25
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27827..29245)
DNA (1419bp) protein (473aa)
beta-lactamase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B59D34
Uncharacterized protein {ECO:0000313|EMBL:KFN41426.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein
SCNpilot_cont_500_bf_scaffold_136_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29437..31590
DNA (2154bp) protein (718aa)
putative metalloendopeptidase; K07386 putative endopeptidase [EC:3.4.24.-] rbh
Putative metalloendopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN32_9GAMM rbh
Putative metalloendopeptidase {ECO:0000313|EMBL:EIL88623.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_500_bf_scaffold_136_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31930..34257
DNA (2328bp) protein (776aa)
Catecholate siderophore receptor Fiu n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN33_9GAMM rbh
Catecholate siderophore receptor Fiu {ECO:0000313|EMBL:EIL88624.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_500_bf_scaffold_136_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34264..34941
DNA (678bp) protein (226aa)
PKHD-type hydroxylase UU5_17027 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
PKHD-type hydroxylase ybiX; K07336 PKHD-type hydroxylase [EC:1.14.11.-]
PKHD-type hydroxylase UU5_17027 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN34_9GAMM
SCNpilot_cont_500_bf_scaffold_136_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35105..37960
DNA (2856bp) protein (952aa)
RNA polymerase-associated protein RapA {ECO:0000256|SAAS:SAAS00017181}; EC=3.6.4.- {ECO:0000256|SAAS:SAAS00017178};; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
helicase SNF2 n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA934
DNA/RNA helicase, superfamily II, SNF2 family
SCNpilot_cont_500_bf_scaffold_136_30
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37961..38923)
DNA (963bp) protein (321aa)
Protein-export membrane protein SecF n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA9_9GAMM
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
protein translocase subunit secF
Displaying items 1-30 of 953 in total

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