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SCNpilot_cont_500_bf_scaffold_136_16

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 52 / 55 BSCG 49 / 51 ASCG 11 / 38
Location: comp(19788..20084)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI0003499407 similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 97.0
  • Bit_score: 163
  • Evalue 8.60e-38
integration host factor subunit beta; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 97.0
  • Bit_score: 163
  • Evalue 4.60e-38
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 97.0
  • Bit_score: 163
  • Evalue 2.10e-37

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Taxonomy

Frateuria aurantia → Frateuria → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGACCAAATCCGAATTGATCACCGCGCTCGCGGAACGCCAGAAGCACCTGGCGTTCGCCGACGTCGAACTCGCGGTGCGCAACGTGATCGAGCAGATGAGCGTGGCACTCGCCGGCGGCGACCGCATCGAGATCCGCGGCTTCGGCAGCTTTTCGTTGCACTACCGTCCGCCACGCACCGGCCGCAATCCCAAGACCGGGACCGCGGTGGCCTTGCCGGGCAAGCATGTCCCGCACTTCAAGCCCGGCAAGGAGTTGCGGCAGCGGGTCAACGAGGGGCGCGATTCGTCACCGTGA
PROTEIN sequence
Length: 99
MTKSELITALAERQKHLAFADVELAVRNVIEQMSVALAGGDRIEIRGFGSFSLHYRPPRTGRNPKTGTAVALPGKHVPHFKPGKELRQRVNEGRDSSP*