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SCNpilot_cont_500_bf_scaffold_197

Search features with annotation key words

Displaying items 1-30 of 282 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_197_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..515
DNA (513bp) protein (171aa)
methylcrotonoyl-CoA carboxylase n=1 Tax=Dyella ginsengisoli RepID=UPI0003484745
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:EIL96635.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
SCNpilot_cont_500_bf_scaffold_197_2
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(528..1088)
DNA (561bp) protein (187aa)
hypothetical protein
Blr6985 protein id=4954740 bin=GWC2_OP3-like_45_7 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_500_bf_scaffold_197_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1108..1968)
DNA (861bp) protein (287aa)
Iron permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Q9_9GAMM rbh
Iron permease {ECO:0000313|EMBL:EIL96200.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
high-affinity Fe2+/Pb2+ permease
SCNpilot_cont_500_bf_scaffold_197_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1976..2314)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D8B0E
Uncharacterized protein {ECO:0000313|EMBL:EIL96199.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_197_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2528..3322
DNA (795bp) protein (265aa)
Enoyl-CoA hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X4_9GAMM rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:EIL94865.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enoyl-CoA hydratase/carnithine racemase rbh
SCNpilot_cont_500_bf_scaffold_197_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3325..3714
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000368776C
Glyoxalase {ECO:0000313|EMBL:AKC87919.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_197_7
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3934..4455
DNA (522bp) protein (174aa)
Cupin n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HBE7_9BURK
Cupin {ECO:0000313|EMBL:ESH86934.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
cupin
SCNpilot_cont_500_bf_scaffold_197_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4458..4976
DNA (519bp) protein (173aa)
Cupin n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA77_9GAMM
Cupin {ECO:0000313|EMBL:KGI78403.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cupin
SCNpilot_cont_500_bf_scaffold_197_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4976..6982
DNA (2007bp) protein (669aa)
acetyl/propionyl-CoA carboxylase, alpha subunit (EC:6.3.4.14 6.4.1.4)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X3_9GAMM
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:EIL94864.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_197_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7204..8514
DNA (1311bp) protein (437aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM7_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90568.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
SCNpilot_cont_500_bf_scaffold_197_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8523..9755
DNA (1233bp) protein (411aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM6_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90567.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
SCNpilot_cont_500_bf_scaffold_197_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9771..11078
DNA (1308bp) protein (436aa)
ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL9_9GAMM
ABC-type antimicrobial peptide transport system, permease component
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGG87976.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_197_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11092..12324
DNA (1233bp) protein (411aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NDN4_9GAMM rbh
ABC-type antimicrobial peptide transport system, permease component rbh
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGG87977.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_197_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12324..13628
DNA (1305bp) protein (435aa)
ABC transporter ATP-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B5120 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHX12149.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ABC-type antimicrobial peptide transport system, permease component
SCNpilot_cont_500_bf_scaffold_197_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13630..14859
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VIZ8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87189.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ABC-type antimicrobial peptide transport system, permease component
SCNpilot_cont_500_bf_scaffold_197_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14932..15828
DNA (897bp) protein (299aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA74_9GAMM
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EIL96365.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
isopropylmalate/homocitrate/citramalate synthase
SCNpilot_cont_500_bf_scaffold_197_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15995..16483
DNA (489bp) protein (163aa)
Acetyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLL0_9GAMM
Acetyltransferase {ECO:0000313|EMBL:EIL88101.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acetyltransferase, N-acetylglutamate synthase
SCNpilot_cont_500_bf_scaffold_197_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16542..17309
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLL2_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL88103.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCNpilot_cont_500_bf_scaffold_197_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17430..17993
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMK9_9GAMM
Elongation factor P {ECO:0000313|EMBL:EIM00701.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
translation elongation factor P/translation initiation factor 5A
SCNpilot_cont_500_bf_scaffold_197_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18347..19879
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000360779C rbh
Amino acid permease {ECO:0000313|EMBL:EIM02066.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
amino acid transporter
SCNpilot_cont_500_bf_scaffold_197_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19911..21353
DNA (1443bp) protein (481aa)
Amino acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NCV4_9GAMM
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AGG88530.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_197_22
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21778..22104)
DNA (327bp) protein (109aa)
High potential iron-sulfur protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WQK0_9GAMM
High potential iron-sulfur protein {ECO:0000313|EMBL:KGI77968.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
High potential iron-sulfur protein
SCNpilot_cont_500_bf_scaffold_197_23
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22147..22881
DNA (735bp) protein (245aa)
Methylthioribulose-1-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_01677}; Short=MTRu-1-P dehydratase {ECO:0000256|HAMAP-Rule:MF_01677};; EC=4.2.1.109 {ECO:0000256|HAMAP-Rule:MF_01677};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
methylthioribulose-1-phosphate dehydratase (EC:4.2.1.109)
methylthioribulose-1-phosphate dehydratase n=1 Tax=Dyella ginsengisoli RepID=UPI0003472ECE
SCNpilot_cont_500_bf_scaffold_197_24
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22878..23423
DNA (546bp) protein (182aa)
Acireductone dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLI1_9GAMM
hypothetical protein, contains double-stranded beta-helix domain
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_197_25
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23441..23926
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D8736
Membrane-flanked domain-containing protein {ECO:0000313|EMBL:EIK94541.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
membrane-flanked domain-containing protein
SCNpilot_cont_500_bf_scaffold_197_26
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23923..24627
DNA (705bp) protein (235aa)
Enolase-phosphatase E1 {ECO:0000256|HAMAP-Rule:MF_01681}; EC=3.1.3.77 {ECO:0000256|HAMAP-Rule:MF_01681};; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000256|HAMAP-Rule:MF_01681}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
Enolase-phosphatase E1 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WQJ7_9GAMM
acireductone synthase
SCNpilot_cont_500_bf_scaffold_197_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24624..25694
DNA (1071bp) protein (357aa)
Peptidase C13 family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH9_9GAMM
Peptidase C13 family
Peptidase C13 family {ECO:0000313|EMBL:AGG88525.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_197_28
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

25691..26599
DNA (909bp) protein (303aa)
nucleotidyltransferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5A8E3
Nucleotidyltransferase {ECO:0000313|EMBL:AKC83138.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_197_29
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

26596..27693
DNA (1098bp) protein (366aa)
Phosphotransferase family protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AXL2_9BACT
hypothetical protein
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
SCNpilot_cont_500_bf_scaffold_197_30
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27840..28313
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031C40E5
2Fe-2S iron-sulfur cluster binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ABQ32196.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Displaying items 1-30 of 282 in total

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