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SCNpilot_cont_500_bf_scaffold_335

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_335_1
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(643..1671)
DNA (1029bp) protein (343aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL12_9GAMM
SCNpilot_cont_500_bf_scaffold_335_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1895..2155
DNA (261bp) protein (87aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL14_9GAMM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
twin arginine-targeting protein translocase, TatA/E family
SCNpilot_cont_500_bf_scaffold_335_3
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2174..2524
DNA (351bp) protein (117aa)
Sec-independent protein translocase protein TatB n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L2X7_FRAAD
twin arginine-targeting protein translocase TatB; K03117 sec-independent protein translocase protein TatB
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_cont_500_bf_scaffold_335_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2511..3296
DNA (786bp) protein (262aa)
Sec-independent protein translocase protein TatC n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL16_9GAMM
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
twin arginine targeting protein translocase subunit TatC
SCNpilot_cont_500_bf_scaffold_335_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3339..4400
DNA (1062bp) protein (354aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
DNA polymerase IV n=1 Tax=Dyella japonica RepID=UPI0002DD34EC
nucleotidyltransferase/DNA polymerase involved in DNA repair
SCNpilot_cont_500_bf_scaffold_335_6
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4906..5922
DNA (1017bp) protein (339aa)
ABC transporter permease n=1 Tax=Dyella japonica RepID=UPI00030321FB
thiosulfate-binding protein; K02048 sulfate transport system substrate-binding protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_500_bf_scaffold_335_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5946..6782
DNA (837bp) protein (279aa)
Sulfate ABC transporter permease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VV89_9GAMM
Sulfate ABC transporter permease {ECO:0000313|EMBL:EIL91130.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cysT; sulfate transport system permease CysT; K02046 sulfate transport system permease protein
SCNpilot_cont_500_bf_scaffold_335_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6779..7642
DNA (864bp) protein (288aa)
sulfate/thiosulfate transporter permease subunit n=1 Tax=Dyella japonica RepID=UPI000311E8FF
Sulfate ABC transporter permease {ECO:0000313|EMBL:AHX13722.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
sulfate ABC transporter permease; K02047 sulfate transport system permease protein
SCNpilot_cont_500_bf_scaffold_335_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7654..8817
DNA (1164bp) protein (388aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cysA; sulfate transport ATP-binding protein; K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25]
ABC transporter n=1 Tax=Dyella japonica RepID=UPI0002E47D40
SCNpilot_cont_500_bf_scaffold_335_10
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8832..10022
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A791E
Porin {ECO:0000313|EMBL:KJV35784.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
oprP; Phosphate-specific outer membrane porin OprP Pyrophosphate-specific outer membrane porin OprO; K07221 phosphate-selective porin OprO and OprP rbh
SCNpilot_cont_500_bf_scaffold_335_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10062..11924)
DNA (1863bp) protein (621aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDY5_9GAMM
SCNpilot_cont_500_bf_scaffold_335_12
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11939..13327)
DNA (1389bp) protein (463aa)
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
dihydrolipoamide acetyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D3C162
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:EYR67621.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
SCNpilot_cont_500_bf_scaffold_335_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13509..14393
DNA (885bp) protein (295aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW73_9GAMM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGG90519.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_335_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14395..17994
DNA (3600bp) protein (1200aa)
Aminopeptidase N n=1 Tax=Rhodanobacter denitrificans RepID=I4WW74_9GAMM
Aminopeptidase N {ECO:0000313|EMBL:AGG90520.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
aminopeptidase N
SCNpilot_cont_500_bf_scaffold_335_15
unknown

Not on your lists

comp(17913..18200)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_335_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18273..19007)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KZ05_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:GAN45443.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_335_17
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19087..19401)
DNA (315bp) protein (105aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B35EBD
antibiotic biosynthesis monooxygenase
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_500_bf_scaffold_335_18
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19398..19853)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037535CE
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_500_bf_scaffold_335_19
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19930..21006)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX36_CORCM rbh
Drug/metabolite transporter permease {ECO:0000313|EMBL:KGM53706.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_335_20
unknown

Not on your lists

comp(21018..21206)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_335_21
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21317..22258
DNA (942bp) protein (314aa)
Biotin transporter BioY n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KT80_STEMA rbh
putative LysR family regulatory protein; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_500_bf_scaffold_335_22
unknown

Not on your lists

comp(22260..23066)
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_335_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23098..24006
DNA (909bp) protein (303aa)
Sel1 repeat protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFS6_9GAMM
Sel1 repeat protein
Sel1 repeat protein {ECO:0000313|EMBL:AGG89739.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_335_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24114..24995
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY78_9GAMM
Sel1 repeat protein
Sel1 repeat protein {ECO:0000313|EMBL:AGG89739.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_335_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25320..26915
DNA (1596bp) protein (532aa)
Major facilitator transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE10_9GAMM
Major facilitator transporter {ECO:0000313|EMBL:EIL97701.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sugar phosphate permease
SCNpilot_cont_500_bf_scaffold_335_26
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27010..28350)
DNA (1341bp) protein (447aa)
C-terminal processing peptidase; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030435A2
Peptidase S41 {ECO:0000313|EMBL:KGI78955.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_cont_500_bf_scaffold_335_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28462..29643)
DNA (1182bp) protein (394aa)
Membrane-bound metallopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZT8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI79000.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
membrane-bound metallopeptidase
SCNpilot_cont_500_bf_scaffold_335_28
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29842..32232)
DNA (2391bp) protein (797aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-) rbh
histidine kinase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3D265 rbh
SCNpilot_cont_500_bf_scaffold_335_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32229..33449)
DNA (1221bp) protein (407aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45578.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Cyclic diguanylate phosphodiesterase domain protein id=2460999 bin=GWF1_Xanthomonadales_69_6 species=Labrenzia alexandrii genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
response regulator receiver/diguanylate phosphodiesterase
SCNpilot_cont_500_bf_scaffold_335_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33530..34291
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTB5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02707.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
Displaying items 1-30 of 71 in total

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