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SCNpilot_cont_500_bf_scaffold_361

Search features with annotation key words

Displaying items 91-120 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_361_91
unknown

Not on your lists

comp(125248..125739)
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_361_92
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(125944..127176)
DNA (1233bp) protein (411aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthetase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B2E51A
SCNpilot_cont_500_bf_scaffold_361_93
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127452..129446)
DNA (1995bp) protein (665aa)
Diguanylate cyclase n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7R6M0_KANKD
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ACV25536.1}; Flags: Precursor;; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125).;"
SCNpilot_cont_500_bf_scaffold_361_94
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(129705..130691)
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
tRNA-dihydrouridine synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPU5_9GAMM
tRNA-U20-dihydrouridine synthase
SCNpilot_cont_500_bf_scaffold_361_95
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130765..132639
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00035E025B
Diguanylate cyclase {ECO:0000313|EMBL:EIL98938.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
diguanylate cyclase
SCNpilot_cont_500_bf_scaffold_361_96
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132590..133066)
DNA (477bp) protein (159aa)
Globin n=1 Tax=Rhodanobacter denitrificans RepID=I4WME8_9GAMM
truncated hemoglobin
Truncated hemoglobin {ECO:0000313|EMBL:AGG87715.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_361_97
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133186..133557
DNA (372bp) protein (124aa)
Ferredoxin n=1 Tax=Rhodanobacter denitrificans RepID=I4WME6_9GAMM
ferredoxin
Ferredoxin {ECO:0000313|EMBL:EIL91832.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_361_98
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133646..134146
DNA (501bp) protein (167aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
peroxiredoxin (EC:1.11.1.5)
Probable thiol peroxidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIE8_9GAMM
SCNpilot_cont_500_bf_scaffold_361_99
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134886..135896)
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
glyceraldehyde-3-phosphate dehydrogenase, type I; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] rbh
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Dyella japonica RepID=UPI0003162A4A rbh
SCNpilot_cont_500_bf_scaffold_361_100
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136016..136831
DNA (816bp) protein (272aa)
Endonuclease n=2 Tax=mine drainage metagenome RepID=T0YQ87_9ZZZZ
S1/P1 Nuclease {ECO:0000313|EMBL:GAN45683.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
S1/P1 Nuclease
SCNpilot_cont_500_bf_scaffold_361_101
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136960..137427)
DNA (468bp) protein (156aa)
Membrane protein containing DUF962 n=2 Tax=mine drainage metagenome RepID=T1AYV3_9ZZZZ
Membrane protein {ECO:0000313|EMBL:GAN45431.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_361_102
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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137618..137953
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Myxococcus xanthus RepID=UPI000362F466
Uncharacterized protein {ECO:0000313|EMBL:AKF86575.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_361_103
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137969..138865)
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI000368B6AA rbh
SCNpilot_cont_500_bf_scaffold_361_104
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138976..139287
DNA (312bp) protein (104aa)
Cytochrome c553 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFY0_9GAMM
Cytochrome c553 {ECO:0000313|EMBL:EIL98371.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c553
SCNpilot_cont_500_bf_scaffold_361_105
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139284..140099
DNA (816bp) protein (272aa)
molecular chaperone DnaJ n=1 Tax=Dyella ginsengisoli RepID=UPI000348F03A
Molecular chaperone DnaJ {ECO:0000313|EMBL:GAN45427.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
protein with DnaJ-like domain
SCNpilot_cont_500_bf_scaffold_361_106
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140258..140923
DNA (666bp) protein (222aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN98_9GAMM
SCNpilot_cont_500_bf_scaffold_361_107
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141439..142155
DNA (717bp) protein (239aa)
Proteobacterial dedicated sortase system response regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRS1_9GAMM
Chemotaxis protein CheY {ECO:0000313|EMBL:GAN45424.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
two component transcriptional regulator, winged helix family
SCNpilot_cont_500_bf_scaffold_361_108
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142297..144300
DNA (2004bp) protein (668aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X9_9GAMM
signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_361_109
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144455..145930
DNA (1476bp) protein (492aa)
Anthranilate synthase component I {ECO:0000313|EMBL:AIF46774.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AIF46774.1};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Rhodanobacter denitrificans RepID=I4WW49_9GAMM
SCNpilot_cont_500_bf_scaffold_361_110
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146278..147375)
DNA (1098bp) protein (366aa)
Putative permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI8_9GAMM
Permease {ECO:0000313|EMBL:KGI78728.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative permease; K11720 lipopolysaccharide export system permease protein
SCNpilot_cont_500_bf_scaffold_361_111
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147387..148505)
DNA (1119bp) protein (373aa)
Putative permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNV6_9GAMM
Permease {ECO:0000313|EMBL:KGI78553.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative permease
SCNpilot_cont_500_bf_scaffold_361_112

Not on your lists

148579..150063
DNA (1485bp) protein (495aa)
leucyl aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1]
Cytosol aminopeptidase n=1 Tax=mine drainage metagenome RepID=T1BQL6_9ZZZZ
Cytosol aminopeptidase {ECO:0000313|EMBL:EQD70873.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_cont_500_bf_scaffold_361_113

Not on your lists

150440..152527
DNA (2088bp) protein (696aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B6BECD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48716.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_361_114
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152547..156164)
DNA (3618bp) protein (1206aa)
Signal transduction histidine kinase n=3 Tax=Rhodanobacter denitrificans RepID=M4NJN1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI78727.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_361_115
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156269..156919
DNA (651bp) protein (217aa)
YceI like family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDL2_9GAMM
Polyisoprenoid-binding protein {ECO:0000313|EMBL:GAN45894.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_361_116
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156900..157469
DNA (570bp) protein (190aa)
Cytochrome B561 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KZA4_FRAAD
cytochrome B561; K12262 cytochrome b561
Cytochrome B561 {ECO:0000313|EMBL:AFC85208.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_cont_500_bf_scaffold_361_117
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157469..158029
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003738C77
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIM01496.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_361_118
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158036..158269)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037378BB
hypothetical protein
Glutaredoxin {ECO:0000313|EMBL:KER84352.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
SCNpilot_cont_500_bf_scaffold_361_119
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158533..159915
DNA (1383bp) protein (461aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT79_9GAMM
L-serine dehydratase {ECO:0000313|EMBL:EIL87747.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_361_120
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160010..161749
DNA (1740bp) protein (580aa)
general secretion pathway protein E n=1 Tax=Dyella japonica RepID=UPI0002EC5973
General secretion pathway protein GspE {ECO:0000313|EMBL:AIF46596.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
type II secretion system protein E (GspE)
Displaying items 91-120 of 156 in total

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