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SCNpilot_cont_500_bf_scaffold_361

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Displaying items 1-30 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_361_1

Not on your lists

448..723
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0ZL54_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD45187.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_361_2
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(794..1078)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JL27_9GAMM
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_500_bf_scaffold_361_3
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1458..1892
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUF8_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV27942.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_500_bf_scaffold_361_4
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2036..2422
DNA (387bp) protein (129aa)
membrane protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B33903
NODE_59, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ95958.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
membrane-associated protein in eicosanoid and glutathione metabolism
SCNpilot_cont_500_bf_scaffold_361_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2441..2776)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A58D2
Uncharacterized protein {ECO:0000313|EMBL:AHX15181.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_361_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2849..4558)
DNA (1710bp) protein (570aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCA4_9GAMM rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:EIL97095.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
SCNpilot_cont_500_bf_scaffold_361_7
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4617..5705)
DNA (1089bp) protein (363aa)
ADP-heptose--LPS heptosyltransferase; K02843 heptosyltransferase II [EC:2.4.-.-]
ADP-heptose:LPS heptosyltransferase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KZN1_FRAAD
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:AFC87091.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_cont_500_bf_scaffold_361_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5761..6861)
DNA (1101bp) protein (367aa)
ADP-heptose--LPS heptosyltransferase; K02843 heptosyltransferase II [EC:2.4.-.-]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E5B513
Uncharacterized protein {ECO:0000313|EMBL:AIF46653.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_500_bf_scaffold_361_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6963..7730
DNA (768bp) protein (256aa)
Lipopolysaccharide core biosynthesis glycosyltransferase n=2 Tax=mine drainage metagenome RepID=T1ATK6_9ZZZZ rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:GAN45021.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
lipopolysaccharide core biosynthesis glycosyl transferase
SCNpilot_cont_500_bf_scaffold_361_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7807..8841
DNA (1035bp) protein (345aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
h16_A2900; GDP-D-mannose 4,6 dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Pseudomonas moraviensis R28 RepID=V8QZI2_9PSED rbh
SCNpilot_cont_500_bf_scaffold_361_11
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8825..9730
DNA (906bp) protein (302aa)
GDP-6-deoxy-D-lyxo-4-hexulose reductase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B56DA5 rbh
3-beta hydroxysteroid dehydrogenase/isomerase family protein {ECO:0000313|EMBL:AIO33587.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
NAD-dependent epimerase/dehydratase rbh
SCNpilot_cont_500_bf_scaffold_361_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9925..10914)
DNA (990bp) protein (330aa)
glycosyl transferase family 1 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4EEE5 rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:GAN45024.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
glycosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_361_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10911..11963)
DNA (1053bp) protein (351aa)
glycosyl transferase family 1 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4EEE5
Glycosyl transferase family 1 {ECO:0000313|EMBL:GAN45024.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
glycosyltransferase
SCNpilot_cont_500_bf_scaffold_361_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11923..13686)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WK54_9GAMM
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGG90756.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_361_15
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13833..15131)
DNA (1299bp) protein (433aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
ribosomal RNA small subunit methyltransferase RsmB; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
16S rRNA methyltransferase n=1 Tax=Dyella japonica RepID=UPI000314F809
SCNpilot_cont_500_bf_scaffold_361_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15128..16075)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D08D3
methionyl-tRNA formyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_361_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16079..16582)
DNA (504bp) protein (168aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88]
peptide deformylase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037BB58D
SCNpilot_cont_500_bf_scaffold_361_18
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16784..17902
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FE939E
Peptidoglycan-binding protein {ECO:0000313|EMBL:AIF46469.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
LysM domain-containing protein
SCNpilot_cont_500_bf_scaffold_361_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17984..19144
DNA (1161bp) protein (387aa)
DNA protecting protein DprA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLP7_9GAMM
DNA protecting protein DprA {ECO:0000313|EMBL:EIL88138.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA protecting protein DprA
SCNpilot_cont_500_bf_scaffold_361_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19219..21753
DNA (2535bp) protein (845aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase 1 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDR1_9GAMM
SCNpilot_cont_500_bf_scaffold_361_21
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21757..22320
DNA (564bp) protein (188aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=1475481 sp
Threonylcarbamoyl-AMP synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIL5_9GAMM
putative translation factor (SUA5)
SCNpilot_cont_500_bf_scaffold_361_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22337..23692
DNA (1356bp) protein (452aa)
Acyl-CoA synthetase/AMP-acid ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM61_9GAMM
AMP-ligase {ECO:0000313|EMBL:GAN45030.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
acyl-CoA synthetase/AMP-acid ligase
SCNpilot_cont_500_bf_scaffold_361_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23726..25033
DNA (1308bp) protein (436aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM4_9GAMM
phosphoribosylamine--glycine ligase
SCNpilot_cont_500_bf_scaffold_361_24
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25189..27060
DNA (1872bp) protein (624aa)
glycerol acyltransferase n=1 Tax=Dyella japonica RepID=UPI0003176981
Glycerol acyltransferase {ECO:0000313|EMBL:GAN45032.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
SCNpilot_cont_500_bf_scaffold_361_25
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27111..27590)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDK3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI76940.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_361_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27818..28738
DNA (921bp) protein (307aa)
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUI0_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_361_27
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28838..29680)
DNA (843bp) protein (281aa)
Putative salt-induced outer membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLE8_9GAMM
Membrane protein {ECO:0000313|EMBL:GAN44949.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative salt-induced outer membrane protein
SCNpilot_cont_500_bf_scaffold_361_28
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29787..30725)
DNA (939bp) protein (313aa)
DMSO reductase chain C n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRD2_9PROT
DMSO reductase {ECO:0000313|EMBL:GAN44948.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
DmsC family protein; K07308 anaerobic dimethyl sulfoxide reductase subunit C (DMSO reductase anchor subunit)
SCNpilot_cont_500_bf_scaffold_361_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30722..31579)
DNA (858bp) protein (286aa)
Ferredoxin {ECO:0000313|EMBL:GAN44947.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Uncharacterized protein id=2974533 bin=GWF1_Xanthomonadales_69_6 species=Acidocella sp. MX-AZ02 genus=Acidocella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
DMSO reductase subunit B
SCNpilot_cont_500_bf_scaffold_361_30
unknown

Not on your lists

31999..32337
DNA (339bp) protein (113aa)

This feature has no annotations

Displaying items 1-30 of 156 in total

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