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SCNpilot_cont_500_bf_scaffold_812

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Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_812_1
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71..2833)
DNA (2763bp) protein (921aa)
TonB-dependent receptor n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B74A89
TonB-dependent receptor {ECO:0000313|EMBL:EZP70323.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_812_2
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2958..4907
DNA (1950bp) protein (650aa)
peptidase t2 asparaginase 2; K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] rbh
peptidase T n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B40F10 rbh
Peptidase t2 asparaginase 2 {ECO:0000313|EMBL:EZP70324.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
SCNpilot_cont_500_bf_scaffold_812_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4897..5337
DNA (441bp) protein (147aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B5D444
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABZ70253.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_500_bf_scaffold_812_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5380..6036
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003673275
Cell Wall Hydrolase family protein {ECO:0000313|EMBL:EZP49265.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SleB-like protein
SCNpilot_cont_500_bf_scaffold_812_5
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6038..7009)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3D9CA
UPF0176 protein Aam_106_015 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
rhodanese domain-containing protein; K07146 UPF0176 protein
SCNpilot_cont_500_bf_scaffold_812_6
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7031..8305)
DNA (1275bp) protein (425aa)
Amidohydrolase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KA55_9SPHN rbh
Amidohydrolase {ECO:0000313|EMBL:EQB30263.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
amidohydrolase
SCNpilot_cont_500_bf_scaffold_812_7
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8341..10521
DNA (2181bp) protein (727aa)
penicillin amidase n=1 Tax=Sphingomonas elodea RepID=UPI0002631678 rbh
Penicillin acylase {ECO:0000313|EMBL:EZP54212.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
penicillin acylase
SCNpilot_cont_500_bf_scaffold_812_8
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10530..11540)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA7AA
WalW protein {ECO:0000313|EMBL:KHA63973.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_812_9
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11546..13237)
DNA (1692bp) protein (564aa)
histidine kinase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA7AB
His Kinase A domain protein {ECO:0000313|EMBL:EZP49016.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
histidine kinase
SCNpilot_cont_500_bf_scaffold_812_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13417..13878
DNA (462bp) protein (154aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas melonis RepID=UPI0003779D58
ArsR family transcriptional regulator {ECO:0000313|EMBL:AIT05221.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
AsnC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_812_11
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13948..15225)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B639C1 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM01359.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_812_12

Not on your lists

15378..16124
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000368AEEF
Uncharacterized protein {ECO:0000313|EMBL:AGU11028.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein; K09861 hypothetical protein
SCNpilot_cont_500_bf_scaffold_812_13
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16121..16777
DNA (657bp) protein (219aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B73188 rbh
DNA, contig: SP612 {ECO:0000313|EMBL:GAN12703.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_812_14
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16872..17180
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037A2CB2
Uncharacterized protein {ECO:0000313|EMBL:EZP49011.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SCNpilot_cont_500_bf_scaffold_812_15
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17726..19945
DNA (2220bp) protein (740aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003157C2D
SCNpilot_cont_500_bf_scaffold_812_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19942..20295
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288DBC0
Uncharacterized protein {ECO:0000313|EMBL:AIT05215.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_812_17
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20238..20720)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II82_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP57533.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_812_18
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20753..21277)
DNA (525bp) protein (175aa)
O-methyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9B84
Putative methyltransferase {ECO:0000313|EMBL:GAO38972.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
O-methyltransferase
SCNpilot_cont_500_bf_scaffold_812_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21354..22268)
DNA (915bp) protein (305aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
fructose-bisphosphate aldolase n=1 Tax=Sphingomonas melonis RepID=UPI00035E8F86
Sphingomonas taxi strain 30a NODE_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29177.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_500_bf_scaffold_812_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22406..22915
DNA (510bp) protein (170aa)
Redoxin family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WUQ0_9SPHN
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AIT05888.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_812_21
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22881..23885)
DNA (1005bp) protein (335aa)
threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] rbh
pyridoxal-5''''-phosphate-dependent protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F1670 rbh
Pyridoxal-5'-phosphate-dependent protein {ECO:0000313|EMBL:KHA63554.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_500_bf_scaffold_812_22
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24025..25185
DNA (1161bp) protein (387aa)
decarboxylase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B60646
Decarboxylase {ECO:0000313|EMBL:KHA63555.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
Orn/DAP/Arg decarboxylase 2
SCNpilot_cont_500_bf_scaffold_812_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25301..26380
DNA (1080bp) protein (360aa)
Deoxyhypusine synthase-like protein {ECO:0000256|HAMAP-Rule:MF_00640}; EC=2.5.-.- {ECO:0000256|HAMAP-Rule:MF_00640};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46]
deoxyhypusine synthase n=1 Tax=Sphingomonas elodea RepID=UPI0002630DB9 rbh
SCNpilot_cont_500_bf_scaffold_812_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26492..28384)
DNA (1893bp) protein (631aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
asparagine synthase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035D0C21 rbh
AsnB protein {ECO:0000313|EMBL:GAN12519.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_812_25
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28384..29904)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035CE7D5 rbh
Transmembrane protein EpsH {ECO:0000313|EMBL:KHA63015.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_812_26
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29901..31046)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000361C51B rbh
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EZP49050.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
putative glycosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_812_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31043..32044)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A70AD
FemAB {ECO:0000313|EMBL:AIT05667.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_812_28
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32041..32871)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035FD231
Polysaccharide deactylase, PEP-CTERM locus subfamily protein {ECO:0000313|EMBL:EZP49048.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
polysaccharide deactylase rbh
SCNpilot_cont_500_bf_scaffold_812_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32873..33892)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037A8F05
Uncharacterized protein {ECO:0000313|EMBL:AIT05669.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
general secretion pathway protein A
SCNpilot_cont_500_bf_scaffold_812_30
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33926..35530)
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003696D51 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHA62969.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
Displaying items 1-30 of 124 in total

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