name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_3468_1
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..685)
|
Conjugal transfer protein TrbF n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3W3_9SPHN
rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EJU15033.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
rbh
|
|
SCNpilot_cont_500_bf_scaffold_3468_2
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(685..2040)
|
conjugal transfer protein TrbL n=1 Tax=Hoeflea sp. 108 RepID=UPI00037834B4
rbh
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:CEJ11236.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
trbL; conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
rbh
|
|
SCNpilot_cont_500_bf_scaffold_3468_3
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2045..2434)
|
Conjugal transfer protein TrbK n=1 Tax=Sphingomonas sp. LH128 RepID=J8W5P6_9SPHN
Conjugal transfer protein TrbK {ECO:0000313|EMBL:KEQ52090.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
trbK; conjugal transfer protein TrbK
|
|
SCNpilot_cont_500_bf_scaffold_3468_4
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2445..3221)
|
conjugal transfer protein TrbJ n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FDECC
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KEQ52091.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
conjugal transfer protein TrbJ
|
|
SCNpilot_cont_500_bf_scaffold_3468_5
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3218..5602)
|
conjugal transfer protein TrbE n=1 Tax=Hoeflea sp. 108 RepID=UPI000370FFC0
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:KEQ52092.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
trbE; conjugal transfer protein TrbE; K03199 type IV secretion system protein VirB4
|
|
SCNpilot_cont_500_bf_scaffold_3468_6
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5615..5896)
|
Conjugal transfer protein TrbB n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3V9_9SPHN
Conjugal transfer protein TrbB {ECO:0000313|EMBL:EJU15028.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3
|
|
SCNpilot_cont_500_bf_scaffold_3468_7
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5896..6228)
|
conjugal transfer protein TrbC n=1 Tax=Hoeflea sp. 108 RepID=UPI0003815591
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KHJ55165.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
trbC; conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
|
|
SCNpilot_cont_500_bf_scaffold_3468_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6225..7160)
|
conjugal transfer protein TrbB n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F2A0D
rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:KEZ17841.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
|
|
SCNpilot_cont_500_bf_scaffold_3468_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7378..7812)
|
CopG family transcripitonal regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003822539
CopG family transcriptional regulator {ECO:0000313|EMBL:KIZ33065.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_10
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7822..9807)
|
TRAG family protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F262_9RHIZ
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:KEZ17839.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
|
|
SCNpilot_cont_500_bf_scaffold_3468_11
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9834..11591)
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3V6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU15023.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_12
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11818..12579)
|
Lytic transglycosylase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQK4_9SPHN
Lytic transglycosylase {ECO:0000313|EMBL:KEZ17837.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
lytic transglycosylase catalytic
|
|
SCNpilot_cont_500_bf_scaffold_3468_13
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(12583..12930)
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W5N8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CEJ11247.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_14
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(12977..13522)
|
Conjugal transfer protein TraF n=2 Tax=Sphingobium RepID=D4Z954_SPHJU
Peptidase S26 {ECO:0000313|EMBL:CEJ11248.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
traF; conjugal transfer protein TraF
|
|
SCNpilot_cont_500_bf_scaffold_3468_15
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13519..14040)
|
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z955_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:KEZ17834.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_16
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(14037..14291)
|
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z956_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:CEJ11250.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_17
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(14288..14602)
|
UPI0003D61451 related cluster n=1 Tax=unknown RepID=UPI0003D61451
Chromosome-partitioning ATPase Soj {ECO:0000313|EMBL:CEJ11251.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ParA-like protein; K03496 chromosome partitioning protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_18
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15046..15642)
|
RepA replication protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000370002A
RepA replication protein {ECO:0000313|EMBL:KHJ55176.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
repA; replication protein A
|
|
SCNpilot_cont_500_bf_scaffold_3468_19
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15642..15863)
|
RepA replication protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0JAN9_9SPHN
RepA replication protein {ECO:0000313|EMBL:KHJ55176.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
putative plasmid replication protein A
|
|
SCNpilot_cont_500_bf_scaffold_3468_20
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15873..16151)
|
Putative phage transcriptional regulator AlpA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HY50_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KEQ52110.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
putative phage transcriptional regulator AlpA
|
|
SCNpilot_cont_500_bf_scaffold_3468_21
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16332..17006)
|
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGJ5_METPB
Uncharacterized protein {ECO:0000313|EMBL:AJE45686.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_22
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17220..17486)
|
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2L6_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI96848.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
|
|
SCNpilot_cont_500_bf_scaffold_3468_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17607..17849)
|
XRE family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HY53_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:EHK54335.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
XRE family transcriptional regulator
|
|
SCNpilot_cont_500_bf_scaffold_3468_24
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18842..19285)
|
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z965_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB07230.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
|
|
SCNpilot_cont_500_bf_scaffold_3468_25
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(19427..19594)
|
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z967_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:CEJ11259.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_26
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19817..20197)
|
Putative fluoride ion transporter CrcB n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=CRCB_GRABC
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
crcB family protein; K06199 CrcB protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_27
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20375..21298)
|
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VC25_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJN03502.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_28
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21597..22634)
|
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRQ0_9RHIZ
DNA primase {ECO:0000313|EMBL:KGJ18048.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_3468_29
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22634..24694)
|
Phospholipid N-methyltransferase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CDJ9_9RHIZ
Methylase {ECO:0000313|EMBL:KEQ52210.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
putative methylase/helicase
|
|
SCNpilot_cont_500_bf_scaffold_3468_30
unknown
|
Not on your lists |
24717..24797
|
This feature has no annotations |