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SCNpilot_cont_500_bf_scaffold_427_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

near complete RP 42 / 55 BSCG 41 / 51 ASCG 12 / 38
Location: comp(3931..4698)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J165_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 250.0
  • Bit_score: 216
  • Evalue 2.90e-53
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC64460.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 248.0
  • Bit_score: 220
  • Evalue 3.70e-54
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 250.0
  • Bit_score: 216
  • Evalue 9.10e-54

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
TTGGAAGACGGGTTAGGCTCCAGCTTATTTCTTCGCAAAAGGTCCGGCGTTTCGCTAACGCAAGCTGGGTCTATTTTTGTCGAGCATGCCCAAGCCGCGCTGAACGAGATTGATCGTGCGGTAGGCGATGTCGGCACGATCGGCCGCGGCAGGTCCGGTACGGTTCGCGTCGGCCTGTCATCTCCGCTCGCAACCGGGTTCCTCGGGGAGCTGCTTATTCGCTTTTGTCAGCAACATGAAGCAGTGCAGCTTGAGTTTGTGGAAGGCACACATACACAGCTCTTCGAGGACTTAGAGCGCGGCAATCTCGATATCGCGTTCATGGCCGCGCCGCTTGACACTGGCAGCCTCGCCACCAAACGGCTGTGGACGGAGGATGTGTTTGTCGTCTTGTCGGAGAATGATGCACTCACGAAAAAGAGCGGAATCGCGTGGAGTGACATCAGGCTGAAGCAGTTTCTGGTGACCGAAGCTGCGCCGGGACGCGACATCGAAGCGTTCGTTTTCCGGCACCTCTCCTCCATTGGATATTCGCCACGGATACAGCGTGACCGCGTGTCGTCACAGACCCTGATGCAGTTGGTTGCGATCGGCAGAGGCATCTCGATAGCGAGCCAATCGGTCGCGGAGACGTCGTTCCCCGGCATCACCTATCGGAAGCTCGAAGGTTGCGCGCTGCCCTTCTCCGCGGTTTGGTCGACCGAGAACGATAACCCGCCCTTTCGTCGGCTGCTGAGCTTGACGGCCGGGCAAGCCGCTACCGCATAA
PROTEIN sequence
Length: 256
LEDGLGSSLFLRKRSGVSLTQAGSIFVEHAQAALNEIDRAVGDVGTIGRGRSGTVRVGLSSPLATGFLGELLIRFCQQHEAVQLEFVEGTHTQLFEDLERGNLDIAFMAAPLDTGSLATKRLWTEDVFVVLSENDALTKKSGIAWSDIRLKQFLVTEAAPGRDIEAFVFRHLSSIGYSPRIQRDRVSSQTLMQLVAIGRGISIASQSVAETSFPGITYRKLEGCALPFSAVWSTENDNPPFRRLLSLTAGQAATA*