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SCNpilot_cont_500_bf_scaffold_427

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Displaying items 1-30 of 311 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_427_1
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..697
DNA (696bp) protein (232aa)
Conjugal transfer protein TrbG n=1 Tax=Sphingomonas sp. LH128 RepID=J8SQH3_9SPHN
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KEQ52087.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
SCNpilot_cont_500_bf_scaffold_427_2
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

694..1914
DNA (1221bp) protein (407aa)
Conjugal transfer protein TrbI n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWE4_9SPHN
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EJU15035.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
trbI; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10
SCNpilot_cont_500_bf_scaffold_427_3
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1917..2141
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JSW5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AJE46469.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_427_4
unknown

Not on your lists

comp(2156..2425)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_427_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2512..3750)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZQ9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34532.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_427_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3931..4698)
DNA (768bp) protein (256aa)
LysR family transcriptional regulator n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J165_POLGS
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC64460.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_427_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5557..7260
DNA (1704bp) protein (568aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp.
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=2 Tax=Alcaligenes RepID=M5J2F6_9BURK
SCNpilot_cont_500_bf_scaffold_427_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7271..7951
DNA (681bp) protein (227aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp.
kdpC2; potassium-transporting ATPase C chain KdpC (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=2 Tax=Alcaligenes RepID=M5IVM0_9BURK
SCNpilot_cont_500_bf_scaffold_427_9
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7967..10051
DNA (2085bp) protein (695aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
potassium-transporting ATPase subunit B (EC:3.6.3.4); K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12] rbh
Potassium-transporting ATPase B chain n=2 Tax=Alcaligenes RepID=U1YIE8_9BURK
SCNpilot_cont_500_bf_scaffold_427_10
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10089..12779
DNA (2691bp) protein (897aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
kdpD; KdpD (EC:2.7.13.3); K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
Uncharacterized protein n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U1ZQF9_9BURK
SCNpilot_cont_500_bf_scaffold_427_11
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12751..13470
DNA (720bp) protein (240aa)
KDP operon transcriptional regulatory protein KdpE n=2 Tax=Alcaligenes RepID=M5J2F9_9BURK
Fis family transcriptional regulator {ECO:0000313|EMBL:KDR38784.1}; Sensor histidine kinase {ECO:0000313|EMBL:CDY74812.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
kdpE2; KDP operon transcriptional regulatory protein KdpE rbh
SCNpilot_cont_500_bf_scaffold_427_12
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13464..14267
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SAG0_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH51928.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_427_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14873..15703
DNA (831bp) protein (277aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQ32_9SPHN rbh
Magnesium transporter {ECO:0000313|EMBL:AIT05253.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Mg2+/Co2+ transporter
SCNpilot_cont_500_bf_scaffold_427_14
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15866..16246
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EU91_SPHCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG48720.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
SCNpilot_cont_500_bf_scaffold_427_15
unknown

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16256..16405
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_427_16
unknown

Not on your lists

comp(16739..17065)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_427_17
unknown

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17096..17413
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_427_18
unknown

Not on your lists

18103..18453
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_427_19
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18736..19164
DNA (429bp) protein (143aa)
GreA/GreB family elongation factor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPI5_9SPHN
GreA/GreB family elongation factor {ECO:0000313|EMBL:EJU14652.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
SCNpilot_cont_500_bf_scaffold_427_trna_5
unknown

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comp(19258..19331)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_427_20
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19477..19851)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003648948
Uncharacterized protein {ECO:0000313|EMBL:AHE54587.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_427_21
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19871..20983)
DNA (1113bp) protein (371aa)
molecular chaperone DnaJ n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000364FB26
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
chaperone protein DnaJ
SCNpilot_cont_500_bf_scaffold_427_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21047..21568)
DNA (522bp) protein (174aa)
molecular chaperone DnaK n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6CE94
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK
SCNpilot_cont_500_bf_scaffold_427_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21550..22890)
DNA (1341bp) protein (447aa)
molecular chaperone DnaK n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037D1ABB
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK
SCNpilot_cont_500_bf_scaffold_427_24
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23055..23495
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8C0
Uncharacterized protein {ECO:0000313|EMBL:KHA63200.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein; K09796 hypothetical protein
SCNpilot_cont_500_bf_scaffold_427_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23506..23964
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000360DC62
Vgr related protein {ECO:0000313|EMBL:AIT06671.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_427_26
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23961..24728)
DNA (768bp) protein (256aa)
Methyltransferase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K7W3_9SPHN rbh
Methyltransferase {ECO:0000313|EMBL:EQB32724.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
methyltransferase-like protein
SCNpilot_cont_500_bf_scaffold_427_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25041..26357)
DNA (1317bp) protein (439aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2]
adenylosuccinate lyase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002885B4F
SCNpilot_cont_500_bf_scaffold_427_28
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26512..27948
DNA (1437bp) protein (479aa)
betaine aldehyde dehydrogenase (EC:1.2.1.8); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
aldehyde dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C8620 rbh
DNA, contig: SP614 {ECO:0000313|EMBL:GAN13189.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_427_29
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27973..29124)
DNA (1152bp) protein (384aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AYM1_AZOBR
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KCZ92131.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
putative acyl-CoA dehydrogenase
Displaying items 1-30 of 311 in total

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