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SCNpilot_cont_500_bf_scaffold_5058

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5058_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1865)
DNA (1863bp) protein (621aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
transketolase; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
UPI0003CEC774 related cluster n=1 Tax=unknown RepID=UPI0003CEC774
SCNpilot_cont_500_bf_scaffold_5058_2
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1995..2468
DNA (474bp) protein (158aa)
UPI0003CEF62A related cluster n=1 Tax=unknown RepID=UPI0003CEF62A
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESW78967.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
AsnC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_5058_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2636..3487
DNA (852bp) protein (284aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P3M0_AZOS1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAI74759.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_500_bf_scaffold_5058_4
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3571..4365
DNA (795bp) protein (265aa)
UPI0003CEC412 related cluster n=1 Tax=unknown RepID=UPI0003CEC412 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:ESW93956.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCNpilot_cont_500_bf_scaffold_5058_5
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4369..5895
DNA (1527bp) protein (509aa)
D-mannonate oxidoreductase n=1 Tax=Rhizobium loti RepID=UPI00036D250A rbh
Mannitol dehydrogenase Rossmann domain protein {ECO:0000313|EMBL:AID31253.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
mannitol-1-phosphate/altronate dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_5058_6
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6091..7272
DNA (1182bp) protein (394aa)
UPI0003CFCA33 related cluster n=1 Tax=unknown RepID=UPI0003CFCA33 rbh
Oxidoreductase {ECO:0000313|EMBL:ESZ45398.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
oxidoreductase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_5058_7
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7319..7753
DNA (435bp) protein (145aa)
UPI0003D060BC related cluster n=1 Tax=unknown RepID=UPI0003D060BC
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY92336.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
ribose binding protein of ABC transporter
SCNpilot_cont_500_bf_scaffold_5058_8
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7713..8279
DNA (567bp) protein (189aa)
Ribose binding protein of ABC transporter n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBJ6_MESOW rbh
ribose binding protein of ABC transporter rbh
Ribose binding protein of ABC transporter {ECO:0000313|EMBL:AEH87743.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_5058_9
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8710..9879
DNA (1170bp) protein (390aa)
ribose ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter related protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFH7_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:CCV10774.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_500_bf_scaffold_5058_10
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9876..10850
DNA (975bp) protein (325aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBJ4_MESOW rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:AEH87741.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_5058_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10847..11833
DNA (987bp) protein (329aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDW2_9RHIZ rbh
Inner-membrane translocator {ECO:0000313|EMBL:CDX27572.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_5058_12
unknown

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12262..13035
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5058_13
Trichoderma virens, Trichoderma, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

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comp(12906..13985)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Hypocrea virens (strain Gv29-8 / FGSC 10586) RepID=G9MT82_HYPVG rbh
Uncharacterized protein {ECO:0000313|EMBL:EHK23124.1}; TaxID=413071 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma.;" source="Hypocrea virens (strain Gv29-8 / FGSC 10586) (Gliocladium virens); (Trichoderma virens).;"
oxidoreductase-like protein rbh
SCNpilot_cont_500_bf_scaffold_5058_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14259..15014
DNA (756bp) protein (252aa)
UPI0003CE33DF related cluster n=1 Tax=unknown RepID=UPI0003CE33DF
ABC transporter binding protein; K02058 simple sugar transport system substrate-binding protein
ABC transporter binding protein {ECO:0000313|EMBL:BAB53487.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Displaying 14 items

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