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SCNpilot_cont_500_bf_scaffold_2085

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2085_1
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1331)
DNA (1329bp) protein (443aa)
ADP-ribosylation/crystallin J1; K05521 ADP-ribosylglycohydrolase [EC:3.2.-.-]
ADP-ribosylation/Crystallin J1 n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7E1_OCHA4
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:ABS17145.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_2085_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1344..2276)
DNA (933bp) protein (311aa)
Inner-membrane translocator n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JM08_9RHIZ
Nucleoside ABC transporter, permease protein 2 {ECO:0000313|EMBL:CDP53692.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_2085_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2273..3346)
DNA (1074bp) protein (358aa)
Inner-membrane translocator n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K0W3_9RHIZ rbh
Nucleoside ABC transporter, permease protein 1 {ECO:0000313|EMBL:CDP53691.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ABC transporter permease; K02057 simple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2085_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3343..4893)
DNA (1551bp) protein (517aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
Galactose/methyl galactoside import ATP-binding protein mglA n=3 Tax=Ochrobactrum intermedium RepID=C4WPC1_9RHIZ rbh
Ribose ABC transport system, ATP-binding protein R bsA {ECO:0000313|EMBL:CDP53690.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SCNpilot_cont_500_bf_scaffold_2085_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4898..6007)
DNA (1110bp) protein (370aa)
Bmp family lipoprotein n=1 Tax=Brucella sp. BO2 RepID=E2PLR0_9RHIZ rbh
Nucleoside ABC transporter, periplasmic nucleoside-binding protein {ECO:0000313|EMBL:CDP53689.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Bmp family lipoprotein rbh
SCNpilot_cont_500_bf_scaffold_2085_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6193..7209
DNA (1017bp) protein (339aa)
LacI family transcription regulator n=1 Tax=Thermus islandicus RepID=UPI0003B5E1BB
Uncharacterized protein {ECO:0000313|EMBL:CDP53688.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ribose operon repressor; K02529 LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2085_7
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7213..8214)
DNA (1002bp) protein (334aa)
UPI0003D00526 related cluster n=1 Tax=unknown RepID=UPI0003D00526 rbh
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:ESZ11822.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
2-hydroxyacid dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_2085_8
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8372..8932
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLT4_MESCW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV09182.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_2085_9
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9035..9466)
DNA (432bp) protein (144aa)
Transcription regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FGY5_9RHIZ
Transcription regulator {ECO:0000313|EMBL:CCV15600.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Fur family ferric uptake regulator; K09826 Fur family transcriptional regulator, iron response regulator
SCNpilot_cont_500_bf_scaffold_2085_10
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9713..10231
DNA (519bp) protein (173aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobact
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA (EC:4.2.1.60); K01716 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60] rbh
UPI0003CF1F7D related cluster n=1 Tax=unknown RepID=UPI0003CF1F7D rbh
SCNpilot_cont_500_bf_scaffold_2085_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10350..11570
DNA (1221bp) protein (407aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] rbh
Beta-ketoacyl-ACP synthase I n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BH9_RHILO rbh
Beta-ketoacyl-ACP synthase I {ECO:0000313|EMBL:BAB51993.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_2085_12
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11584..12396
DNA (813bp) protein (271aa)
short-chain dehydrogenase/reductase SDR; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLT9_MESCW rbh
SCNpilot_cont_500_bf_scaffold_2085_13
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12480..14027
DNA (1548bp) protein (516aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDR7_MESAW rbh
diguanylate cyclase (GGDEF) domain-containing protein rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGB42519.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_2085_14
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14044..15054)
DNA (1011bp) protein (337aa)
methyltransferase small; K00564 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] rbh
UPI0003D00982 related cluster n=1 Tax=unknown RepID=UPI0003D00982 rbh
Methyltransferase small {ECO:0000313|EMBL:CDX45983.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_cont_500_bf_scaffold_2085_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15183..15521)
DNA (339bp) protein (113aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EEX4_9RHIZ
polyribonucleotide nucleotidyltransferase
Displaying 15 items

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