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SCNpilot_cont_500_bf_scaffold_2163

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2163_1
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..166)
DNA (165bp) protein (55aa)
UPI0003D051E2 related cluster n=1 Tax=unknown RepID=UPI0003D051E2
Aminopeptidase {ECO:0000313|EMBL:ESZ30248.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
peptidase S58 DmpA
SCNpilot_cont_500_bf_scaffold_2163_2
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229..1674)
DNA (1446bp) protein (482aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00195506};; Flags: Fragment;; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exodeoxyribonuclease VII large subunit (Fragment) n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRR7_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_2163_3
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1745..1981)
DNA (237bp) protein (79aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FQ36_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:ESX82768.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2163_4
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2781..3071
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00030ED80E
Uncharacterized protein {ECO:0000313|EMBL:AID28308.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2163_5
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3240..4295)
DNA (1056bp) protein (352aa)
UPI0003CF006C related cluster n=1 Tax=unknown RepID=UPI0003CF006C rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY24798.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2163_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4459..5832)
DNA (1374bp) protein (458aa)
Glutamate--cysteine ligase B, chloroplastic {ECO:0000313|EMBL:CDX43601.1}; EC=6.3.2.2 {ECO:0000313|EMBL:CDX43601.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
glutamate/cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2] rbh
glutamate--cysteine ligase n=1 Tax=Rhizobium loti RepID=UPI000374A571 rbh
SCNpilot_cont_500_bf_scaffold_2163_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6149..6883)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] rbh
UPI0003CEF5EC related cluster n=1 Tax=unknown RepID=UPI0003CEF5EC rbh
SCNpilot_cont_500_bf_scaffold_2163_8
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7120..7515
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SM89_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KAJ03649.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
glutathione-dependent formaldehyde-activating GFA
SCNpilot_cont_500_bf_scaffold_2163_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8296..8994
DNA (699bp) protein (233aa)
UPI0003CEFE25 related cluster n=1 Tax=unknown RepID=UPI0003CEFE25 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX54398.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
glutamine amidotransferase rbh
SCNpilot_cont_500_bf_scaffold_2163_10
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9374..9505
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y247_MESOW
Uncharacterized protein {ECO:0000313|EMBL:ESY75751.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2163_11
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9709..10542)
DNA (834bp) protein (278aa)
metallophosphoesterase; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16] rbh
Metallophosphoesterase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNA5_MESCW rbh
Bis(5'nucleosyl)-tetraphosphatase, ApaH {ECO:0000313|EMBL:EHH02360.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_500_bf_scaffold_2163_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10616..11164)
DNA (549bp) protein (183aa)
L-lactate dehydrogenase, FMN-linked {ECO:0000313|EMBL:CDX19590.1}; EC=1.1.2.3 {ECO:0000313|EMBL:CDX19590.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
FMN-dependent alpha-hydroxy acid dehydrogenase; K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
UPI0003CE0919 related cluster n=1 Tax=unknown RepID=UPI0003CE0919
SCNpilot_cont_500_bf_scaffold_2163_13
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11690..12499)
DNA (810bp) protein (270aa)
DNA-binding transcriptional dual regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6E9_9RHIZ rbh
DNA-binding transcriptional dual regulator {ECO:0000313|EMBL:CCV11851.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex rbh
SCNpilot_cont_500_bf_scaffold_2163_14
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12710..14032
DNA (1323bp) protein (441aa)
Mlr6914 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q987U1_RHILO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AID28318.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_2163_15
unknown

Not on your lists

comp(13879..14172)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2163_16
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14675..15079)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI000382CB80
Strain SA-120 Contig238, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01544.1}; Flags: Fragment;; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
SCNpilot_cont_500_bf_scaffold_2163_17
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15439..15618
DNA (180bp) protein (60aa)
UPI0003CFD789 related cluster n=1 Tax=unknown RepID=UPI0003CFD789
FAD-binding protein {ECO:0000313|EMBL:ESY17688.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
FAD/FMN-dependent dehydrogenase
SCNpilot_cont_500_bf_scaffold_2163_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16055..16570
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F604_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX33451.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2163_19
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16846..17838
DNA (993bp) protein (331aa)
FAD linked oxidase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YED9_9RHIZ
Glycolate oxidase FAD binding subunit {ECO:0000313|EMBL:CDX32784.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
glycolate oxidase subunits GlcE; K11472 glycolate oxidase FAD binding subunit
SCNpilot_cont_500_bf_scaffold_2163_20
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17835..18218
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YED8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX33460.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2163_21
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18844..19509
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YED7_9RHIZ
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit
SCNpilot_cont_500_bf_scaffold_2163_22
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19560..20480)
DNA (921bp) protein (307aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] rbh
Bifunctional protein FolD n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNB2_MESCW rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_2163_23
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20748..21572)
DNA (825bp) protein (275aa)
UPI0003CE395F related cluster n=1 Tax=unknown RepID=UPI0003CE395F rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:CDX32772.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
ErfK/YbiS/YcfS/YnhG family protein rbh
SCNpilot_cont_500_bf_scaffold_2163_24
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21699..22337
DNA (639bp) protein (213aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] rbh
DNA-3-methyladenine glycosylase I n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YED4_9RHIZ rbh
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EHH09903.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_500_bf_scaffold_2163_25
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22465..22848)
DNA (384bp) protein (128aa)
Mll6926 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q987T2_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX61142.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2163_26
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22891..23139)
DNA (249bp) protein (83aa)
UPI0003D02274 related cluster n=1 Tax=unknown RepID=UPI0003D02274
Uncharacterized protein {ECO:0000313|EMBL:ESZ18308.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2163_27
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23465..24823
DNA (1359bp) protein (453aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Histidine--tRNA ligase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FII5_9RHIZ rbh
histidyl-tRNA synthetase
SCNpilot_cont_500_bf_scaffold_2163_28
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24843..25964
DNA (1122bp) protein (374aa)
UPI0003CF719D related cluster n=1 Tax=unknown RepID=UPI0003CF719D rbh
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
tRNA synthetase class II (G H P and S); K02502 ATP phosphoribosyltransferase regulatory subunit rbh
SCNpilot_cont_500_bf_scaffold_2163_29
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25961..26662
DNA (702bp) protein (234aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] rbh
ATP phosphoribosyltransferase n=1 Tax=Rhizobium loti RepID=UPI0003824CB2 rbh
SCNpilot_cont_500_bf_scaffold_2163_30
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26848..28614
DNA (1767bp) protein (589aa)
AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] rbh
AMP-binding domain protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEC9_9RHIZ rbh
AMP-binding domain protein {ECO:0000313|EMBL:EHH09898.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Displaying items 1-30 of 39 in total

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