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SCNpilot_cont_500_bf_scaffold_2222

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Displaying items 1-30 of 66 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2222_1
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2339
DNA (2337bp) protein (779aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB32_9RHIZ
SCNpilot_cont_500_bf_scaffold_2222_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2407..3078)
DNA (672bp) protein (224aa)
UPI0003CF5B1C related cluster n=1 Tax=unknown RepID=UPI0003CF5B1C rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY73134.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2222_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3409..4161
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000360F94E
Uncharacterized protein {ECO:0000313|EMBL:AID33334.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2222_4
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4621..5001
DNA (381bp) protein (127aa)
UPI0003CFCF2E related cluster n=1 Tax=unknown RepID=UPI0003CFCF2E
Uncharacterized protein {ECO:0000313|EMBL:ESZ06255.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2222_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5116..5682)
DNA (567bp) protein (189aa)
Phosphinothricin N-acetyltransferase {ECO:0000313|EMBL:CDX30367.1}; EC=2.3.1.183 {ECO:0000313|EMBL:CDX30367.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phosphinothricin acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183] rbh
Phosphinotricin acetyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB36_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_2222_6
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5801..6580)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TIT2_MESCW rbh
hypothetical protein; K06890 rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV10128.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_2222_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6813..9356)
DNA (2544bp) protein (848aa)
glycosyl transferase family 1 n=1 Tax=Rhizobium loti RepID=UPI0003694F5C
Permease family protein {ECO:0000313|EMBL:AID33340.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
SCNpilot_cont_500_bf_scaffold_2222_8
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9361..10056)
DNA (696bp) protein (232aa)
ABC transporter related protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THY1_MESCW rbh
ABC transporter; K02003 putative ABC transport system ATP-binding protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ADV10126.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_2222_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10121..10789
DNA (669bp) protein (223aa)
UPI0003CFC8F9 related cluster n=1 Tax=unknown RepID=UPI0003CFC8F9 rbh
Hydrolase GDSL {ECO:0000313|EMBL:ESZ06250.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
G-D-S-L family lipolytic protein rbh
SCNpilot_cont_500_bf_scaffold_2222_10
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10913..11497
DNA (585bp) protein (195aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] rbh
UPI0003CF8368 related cluster n=1 Tax=unknown RepID=UPI0003CF8368 rbh
SCNpilot_cont_500_bf_scaffold_2222_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11564..12067)
DNA (504bp) protein (168aa)
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDX40254.1}; EC=3.1.3.2 {ECO:0000313|EMBL:CDX40254.1};; EC=3.1.3.48 {ECO:0000313|EMBL:CDX40254.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
UPI0003CE9F63 related cluster n=1 Tax=unknown RepID=UPI0003CE9F63
SCNpilot_cont_500_bf_scaffold_2222_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12242..12535
DNA (294bp) protein (98aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
pterin-4a-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB43_9RHIZ
SCNpilot_cont_500_bf_scaffold_2222_13
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12676..13038
DNA (363bp) protein (121aa)
UPI0003D04545 related cluster n=1 Tax=unknown RepID=UPI0003D04545
Uncharacterized protein {ECO:0000313|EMBL:ESZ00998.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2222_14
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13358..13924
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB45_9RHIZ rbh
Signal peptide protein {ECO:0000313|EMBL:ESW77708.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
invasion associated locus B family protein rbh
SCNpilot_cont_500_bf_scaffold_2222_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14082..15410
DNA (1329bp) protein (443aa)
diguanylate cyclase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0D0A
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABS69638.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_2222_16
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15455..16807)
DNA (1353bp) protein (451aa)
Chloride channel protein EriC n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHC6_MESAW rbh
chloride channel protein EriC rbh
Chloride channel protein EriC {ECO:0000313|EMBL:AGB43473.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_2222_17
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16989..17288)
DNA (300bp) protein (100aa)
UPI0003CEDC08 related cluster n=1 Tax=unknown RepID=UPI0003CEDC08
Uncharacterized protein {ECO:0000313|EMBL:ESY90109.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2222_18
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17627..18994
DNA (1368bp) protein (456aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQK0_MESAW rbh
Putative transport protein hsrA {ECO:0000313|EMBL:AID28463.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
drug resistance transporter, EmrB/QacA subfamily rbh
SCNpilot_cont_500_bf_scaffold_2222_19
unknown

Not on your lists

comp(19010..19339)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2222_20
unknown

Not on your lists

comp(19493..19726)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2222_21
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19886..20128)
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_cont_500_bf_scaffold_2222_22
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20345..20659
DNA (315bp) protein (105aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1
radical SAM enzyme, Cfr family; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
50S rRNA methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FE32_9RHIZ
SCNpilot_cont_500_bf_scaffold_2222_23
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20656..21102
DNA (447bp) protein (149aa)
UPI0003CE7BC3 related cluster n=1 Tax=unknown RepID=UPI0003CE7BC3
Uncharacterized protein {ECO:0000313|EMBL:ESY73148.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2222_24
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21099..21587
DNA (489bp) protein (163aa)
UPI0003D007F4 related cluster n=1 Tax=unknown RepID=UPI0003D007F4
Uncharacterized protein {ECO:0000313|EMBL:ESZ06243.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2222_25
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21559..22200)
DNA (642bp) protein (214aa)
Putative threonine efflux protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGH3_MESAW rbh
putative threonine efflux protein rbh
LysE type translocator family protein {ECO:0000313|EMBL:AID33353.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_2222_26
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22260..24317)
DNA (2058bp) protein (686aa)
diguanylate cyclase n=1 Tax=Rhizobium loti RepID=UPI0003764013 rbh
Diguanylate cyclase domain protein {ECO:0000313|EMBL:AID33355.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2222_27
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24565..25788
DNA (1224bp) protein (408aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] rbh
UPI0003CE771B related cluster n=1 Tax=unknown RepID=UPI0003CE771B rbh
SCNpilot_cont_500_bf_scaffold_2222_28
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26495..26722
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YB61_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH85467.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_2222_29
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26769..27569)
DNA (801bp) protein (267aa)
UPI0003CF3288 related cluster n=1 Tax=unknown RepID=UPI0003CF3288 rbh
Murein transglycosylase {ECO:0000313|EMBL:ESY73152.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
transglycosylase rbh
SCNpilot_cont_500_bf_scaffold_2222_30
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27978..28580
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB54_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX25981.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
Displaying items 1-30 of 66 in total

View Taxonomy