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SCNpilot_cont_500_bf_scaffold_2356

Search features with annotation key words

Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2356_1
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..389)
DNA (387bp) protein (129aa)
UPI0003D00DF5 related cluster n=1 Tax=unknown RepID=UPI0003D00DF5
LysR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ESZ29791.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_cont_500_bf_scaffold_2356_2
unknown

Not on your lists

comp(748..1215)
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2356_3
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1436..2185
DNA (750bp) protein (250aa)
UPI0003CFE608 related cluster n=1 Tax=unknown RepID=UPI0003CFE608
Diguanylate cyclase {ECO:0000313|EMBL:ESZ29792.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
family 5 extracellular solute-binding protein
SCNpilot_cont_500_bf_scaffold_2356_4
unknown

Not on your lists

comp(2236..2415)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2356_5
unknown

Not on your lists

2673..2903
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2356_6
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3028..3213
DNA (186bp) protein (62aa)
UPI0003CFB472 related cluster n=1 Tax=unknown RepID=UPI0003CFB472
Uncharacterized protein {ECO:0000313|EMBL:ESZ20554.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_2356_7
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3254..4240)
DNA (987bp) protein (329aa)
NAD-dependent epimerase/dehydratase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6] rbh
UPI0003D04C6C related cluster n=1 Tax=unknown RepID=UPI0003D04C6C rbh
NAD dependent epimerase/dehydratase {ECO:0000313|EMBL:ESZ10209.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_2356_8
unknown

Not on your lists

4576..6966
DNA (2391bp) protein (797aa)
UPI0003CE0505 related cluster n=1 Tax=unknown RepID=UPI0003CE0505
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2356_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7903..8634)
DNA (732bp) protein (244aa)
Mlr7525 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985U5_RHILO rbh
hypothetical protein rbh
Mlr7525 protein {ECO:0000313|EMBL:BAB53967.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_2356_10
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8767..9264)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F583_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESW92221.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2356_11
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9322..10356
DNA (1035bp) protein (345aa)
adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] rbh
UPI0003D02482 related cluster n=1 Tax=unknown RepID=UPI0003D02482 rbh
Adenine glycosylase {ECO:0000313|EMBL:ESZ73240.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
SCNpilot_cont_500_bf_scaffold_2356_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11128..12261)
DNA (1134bp) protein (378aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Modification methylase BabI n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F578_9RHIZ rbh
DNA modification methylase rbh
SCNpilot_cont_500_bf_scaffold_2356_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12435..13124
DNA (690bp) protein (230aa)
Mll7519 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985V0_RHILO rbh
hypothetical protein rbh
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:ETA71945.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_cont_500_bf_scaffold_2356_14
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13249..13953)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBV8_MESOW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEH90000.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_2356_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14073..15479
DNA (1407bp) protein (469aa)
Threonine synthase {ECO:0000313|EMBL:EHH03686.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EHH03686.1};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] rbh
Threonine synthase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKK1_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_2356_16
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15494..16786
DNA (1293bp) protein (431aa)
processing peptidase (EC:3.4.24.64) rbh
Processing peptidase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBW0_MESOW rbh
Peptidase M16 {ECO:0000313|EMBL:ESY69816.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_500_bf_scaffold_2356_17
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16802..17398
DNA (597bp) protein (199aa)
ribosomal-protein-alanine N-acetyltransferase (EC:2.3.1.128); K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] rbh
GCN5 family N-acetyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTT4_9RHIZ rbh
GCN5 family N-acetyltransferase {ECO:0000313|EMBL:ESX83209.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_cont_500_bf_scaffold_2356_18
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17402..20290
DNA (2889bp) protein (963aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and periplasmic/7TM domain sensor(S) n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBW2_MESOW rbh
PAS/PAC and periplasmic/7TM domain sensor-containing diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase {ECO:0000313|EMBL:ESY78689.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_cont_500_bf_scaffold_2356_19
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20281..20955)
DNA (675bp) protein (225aa)
UPF0301 protein mlr7511 n=7 Tax=Mesorhizobium RepID=Y7511_RHILO rbh
UPF0301 protein MCHK_0992 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein; K07735 putative transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2356_20
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21113..21919
DNA (807bp) protein (269aa)
UPI0003D06303 related cluster n=1 Tax=unknown RepID=UPI0003D06303 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ29809.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_cont_500_bf_scaffold_2356_21
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22104..22586
DNA (483bp) protein (161aa)
Redoxin domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBW5_MESOW
Redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:AEH90007.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_2356_22
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22654..23133
DNA (480bp) protein (160aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTT0_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESX83204.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2356_23
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23271..23798)
DNA (528bp) protein (176aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Ribonuclease H n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7Z6_9RHIZ rbh
ribonuclease HI rbh
SCNpilot_cont_500_bf_scaffold_2356_24
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23795..24757)
DNA (963bp) protein (321aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
homoserine kinase (EC:2.7.1.39); K02204 homoserine kinase type II [EC:2.7.1.39] rbh
UPI0003CE647D related cluster n=1 Tax=unknown RepID=UPI0003CE647D rbh
SCNpilot_cont_500_bf_scaffold_2356_25
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24763..25020)
DNA (258bp) protein (86aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
UPI0003CE799B related cluster n=1 Tax=unknown RepID=UPI0003CE799B
SCNpilot_cont_500_bf_scaffold_2356_26
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25809..26564)
DNA (756bp) protein (252aa)
UPI0003CEE86D related cluster n=1 Tax=unknown RepID=UPI0003CEE86D rbh
Cytochrome oxidase {ECO:0000313|EMBL:ESX52074.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
Surfeit locus 1 family protein rbh
SCNpilot_cont_500_bf_scaffold_2356_27
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26561..26947)
DNA (387bp) protein (129aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRA9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX34876.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2356_28
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27031..27912)
DNA (882bp) protein (294aa)
cytochrome C oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] rbh
UPI0003CFB097 related cluster n=1 Tax=unknown RepID=UPI0003CFB097 rbh
Cytochrome B562 {ECO:0000313|EMBL:ESZ29821.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_cont_500_bf_scaffold_2356_29
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27914..28543)
DNA (630bp) protein (210aa)
UPI0003CFBC3E related cluster n=1 Tax=unknown RepID=UPI0003CFBC3E rbh
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
cytochrome oxidase assembly factor rbh
SCNpilot_cont_500_bf_scaffold_2356_30
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28551..28718)
DNA (168bp) protein (56aa)
UPI0003CEB72D related cluster n=1 Tax=unknown RepID=UPI0003CEB72D
Protoheme IX farnesyltransferase {ECO:0000313|EMBL:ESY73331.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
Displaying items 1-30 of 43 in total

View Taxonomy
NameRatio
Mesorhizobium
86.05%
unknown
13.95%
Mesorhizobium: 0.8604651162790697unknown: 0.13953488372093023Mesorhizobiumunknown