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SCNpilot_cont_500_bf_scaffold_2641

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2641_1
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..407
DNA (405bp) protein (135aa)
magnesium transporter ApaG n=1 Tax=Rhizobium loti RepID=UPI00036967D5
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
apaG; ApaG protein; K06195 ApaG protein
SCNpilot_cont_500_bf_scaffold_2641_2
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(599..790)
DNA (192bp) protein (64aa)
Hsp33-like chaperonin n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3M1_9RHIZ
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
disulfide bond chaperone
SCNpilot_cont_500_bf_scaffold_2641_3
unknown

Not on your lists

846..1445
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2641_4
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1546..2457)
DNA (912bp) protein (304aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Ornithine carbamoyltransferase, catabolic n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KSZ9_MESAW rbh
ornithine carbamoyltransferase rbh
SCNpilot_cont_500_bf_scaffold_2641_5
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2472..3668)
DNA (1197bp) protein (399aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Acetylornithine aminotransferase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KS31_MESAW rbh
acetylornithine/succinylornithine aminotransferase rbh
SCNpilot_cont_500_bf_scaffold_2641_6
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4022..4543
DNA (522bp) protein (174aa)
UPI0003D02AEB related cluster n=1 Tax=unknown RepID=UPI0003D02AEB rbh
GcrA cell cycle regulator; K13583 GcrA cell cycle regulator rbh
GcrA cell cycle regulator {ECO:0000313|EMBL:ESZ26320.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_cont_500_bf_scaffold_2641_7
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4677..5402)
DNA (726bp) protein (242aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FLM4_9RHIZ rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
phosphate transport system regulatory protein PhoU rbh
SCNpilot_cont_500_bf_scaffold_2641_8
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5512..6777)
DNA (1266bp) protein (422aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
phosphate regulon, two-component sensor histidine kinase, phoR; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] rbh
UPI0003D004D1 related cluster n=1 Tax=unknown RepID=UPI0003D004D1 rbh
SCNpilot_cont_500_bf_scaffold_2641_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7146..8048
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3M8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX24598.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
polyphosphate kinase 2, PA0141 family rbh
SCNpilot_cont_500_bf_scaffold_2641_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8146..8907)
DNA (762bp) protein (254aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3M9_9RHIZ rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:CDX15317.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
enoyl-CoA hydratase/carnithine racemase rbh
SCNpilot_cont_500_bf_scaffold_2641_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8907..9545)
DNA (639bp) protein (213aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003D01BAA related cluster n=1 Tax=unknown RepID=UPI0003D01BAA rbh
autoinducer synthesis protein rbh
SCNpilot_cont_500_bf_scaffold_2641_12
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9637..10386)
DNA (750bp) protein (250aa)
LuxR family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3N1_9RHIZ rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:EHH13660.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
DNA-binding protein with HTH domain rbh
SCNpilot_cont_500_bf_scaffold_2641_13
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10602..11453
DNA (852bp) protein (284aa)
Extracellular solute-binding protein family 3 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEE1_9RHIZ rbh
Family 3 extracellular solute-binding protein {ECO:0000313|EMBL:CDX24588.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
family 3 extracellular solute-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2641_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11489..11956)
DNA (468bp) protein (156aa)
Putative transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2L985_9RHIZ
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KDP71682.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2641_15
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12139..13116
DNA (978bp) protein (326aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Rhizobium sp. CF142 RepID=J1SWH6_9RHIZ rbh
Epoxide hydrolase {ECO:0000313|EMBL:KDP71681.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ephA; epoxide hydrolase rbh
SCNpilot_cont_500_bf_scaffold_2641_16
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13145..13558)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EFM1_9RHIZ
hypothetical protein
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000313|EMBL:AID27881.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_2641_17
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14338..15360
DNA (1023bp) protein (341aa)
lysK; lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Lysine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000255|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00177}; Short=LysRS {ECO:0000255|HAMAP-Rule:MF_00177};; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Lysine--tRNA ligase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=SYK_RHILO
SCNpilot_cont_500_bf_scaffold_2641_18
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15317..16177)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3N5_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13664.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2641_19
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16282..16932)
DNA (651bp) protein (217aa)
UPI0003CF3D50 related cluster n=1 Tax=unknown RepID=UPI0003CF3D50 rbh
DNA-binding protein {ECO:0000313|EMBL:ESY94741.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
putative transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2641_20
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17112..17417)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KT16_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB48261.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_2641_21
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17709..18023)
DNA (315bp) protein (105aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000378C494
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EHH13667.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
3-hydroxyacyl-CoA dehydrogenase
SCNpilot_cont_500_bf_scaffold_2641_22
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18322..18645
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS63116.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
SCNpilot_cont_500_bf_scaffold_2641_23
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18738..19607
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Cronobacter sakazakii 701 RepID=K8CYE3_CROSK
Uncharacterized protein {ECO:0000313|EMBL:CCK03440.1}; TaxID=1208663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 701.;"
Displaying 23 items

View Taxonomy