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SCNpilot_cont_500_bf_scaffold_2725

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2725_1
unknown

Not on your lists

comp(3..125)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2725_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122..2035)
DNA (1914bp) protein (638aa)
UPI0003CF97F4 related cluster n=1 Tax=unknown RepID=UPI0003CF97F4 rbh
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:ESY74398.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
AMP-dependent synthetase and ligase rbh
SCNpilot_cont_500_bf_scaffold_2725_3
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2529..4121
DNA (1593bp) protein (531aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KBC5_MESAW rbh
ABC-type dipeptide transport system, periplasmic component rbh
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:AGB42622.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_2725_4
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4173..5180
DNA (1008bp) protein (336aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KC84_MESAW rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AGB42621.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_2725_5
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5182..6105
DNA (924bp) protein (308aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGG6_MESOW rbh
binding-protein-dependent transport systems inner membrane component; K12370 dipeptide transport system permease protein rbh
Peptide ABC transporter {ECO:0000313|EMBL:ESY66710.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_500_bf_scaffold_2725_6
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6111..6968
DNA (858bp) protein (286aa)
UPI0003CFE4E3 related cluster n=1 Tax=unknown RepID=UPI0003CFE4E3 rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ26473.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
ABC transporter; K12371 dipeptide transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2725_7
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6965..7792
DNA (828bp) protein (276aa)
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFF7_MESOW rbh
ABC transporter; K12372 dipeptide transport system ATP-binding protein rbh
ABC transporter ATP-binding component {ECO:0000313|EMBL:CDX45876.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_cont_500_bf_scaffold_2725_8
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8033..9307)
DNA (1275bp) protein (425aa)
cysteine desulfurase (EC:2.8.1.7) rbh
UPI0003CF5A13 related cluster n=1 Tax=unknown RepID=UPI0003CF5A13 rbh
Aminotransferase {ECO:0000313|EMBL:ESY66713.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_500_bf_scaffold_2725_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9403..10077)
DNA (675bp) protein (225aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBL4_9RHIZ rbh
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:EHH10855.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family rbh
SCNpilot_cont_500_bf_scaffold_2725_10
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10328..11125)
DNA (798bp) protein (266aa)
UPI0003CEC435 related cluster n=1 Tax=unknown RepID=UPI0003CEC435 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY74390.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
family 3 extracellular solute-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2725_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11198..12394)
DNA (1197bp) protein (399aa)
Aspartate aminotransferase {ECO:0000313|EMBL:CDX45858.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDX45858.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
UPI0003D05C0F related cluster n=1 Tax=unknown RepID=UPI0003D05C0F rbh
aspartate aminotransferase
SCNpilot_cont_500_bf_scaffold_2725_12
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12529..13368)
DNA (840bp) protein (280aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] rbh
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBL7_9RHIZ rbh
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:EHH10858.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_500_bf_scaffold_2725_13
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13523..14530
DNA (1008bp) protein (336aa)
Mlr5427 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BU1_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX45854.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2725_14
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14670..15137)
DNA (468bp) protein (156aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF122 RepID=J3BLH1_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJL53139.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2725_15
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15197..15628
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZER2_TERRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL87730.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_500_bf_scaffold_2725_16
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16294..17301)
DNA (1008bp) protein (336aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase domain protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUK9_9RHIZ
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:CCV03356.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
SCNpilot_cont_500_bf_scaffold_2725_17
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17677..18015
DNA (339bp) protein (113aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE31790.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_cont_500_bf_scaffold_2725_18
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18161..18631)
DNA (471bp) protein (157aa)
Transcriptional regulator, MarR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFE8_MESOW
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:ESY83453.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_cont_500_bf_scaffold_2725_19
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18625..19092)
DNA (468bp) protein (156aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7HB51_9RHIZ
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ESX73482.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_2725_20
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19297..20151)
DNA (855bp) protein (285aa)
UPI0003CF6A3A related cluster n=1 Tax=unknown RepID=UPI0003CF6A3A
Salicylyl-CoA 5-hydroxylase {ECO:0000313|EMBL:ESZ51229.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
NADH:flavin oxidoreductase
SCNpilot_cont_500_bf_scaffold_2725_21
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20583..21467)
DNA (885bp) protein (295aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EGA1_9RHIZ
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:CCV03352.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
NADH:flavin oxidoreductase
SCNpilot_cont_500_bf_scaffold_2725_22
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21606..22220)
DNA (615bp) protein (205aa)
glyoxalase n=1 Tax=Rhizobium loti RepID=UPI00036E576E rbh
hypothetical protein rbh
Mll5435 protein {ECO:0000313|EMBL:BAB51888.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_2725_23
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22297..23133)
DNA (837bp) protein (279aa)
UPI0003CF3477 related cluster n=1 Tax=unknown RepID=UPI0003CF3477 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY74382.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
ATPase component of various ABC-type transport systems with duplicated ATPase domain rbh
SCNpilot_cont_500_bf_scaffold_2725_24
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23126..24010)
DNA (885bp) protein (295aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BT2_RHILO rbh
ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAB51890.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_2725_25
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24007..24852)
DNA (846bp) protein (282aa)
UPI0003CE0884 related cluster n=1 Tax=unknown RepID=UPI0003CE0884 rbh
ABC transporter permease {ECO:0000313|EMBL:ESY84830.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2725_26
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24845..25852)
DNA (1008bp) protein (336aa)
UPI0003CEA898 related cluster n=1 Tax=unknown RepID=UPI0003CEA898 rbh
ABC transporter permease {ECO:0000313|EMBL:ESY66727.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
ABC-type dipeptide/oligopeptide/nickel transport system, permease component rbh
SCNpilot_cont_500_bf_scaffold_2725_27
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26061..27590)
DNA (1530bp) protein (510aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Rhizobium loti RepID=UPI00037B18D5 rbh
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:AID34249.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2725_28
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27698..29272)
DNA (1575bp) protein (525aa)
UPI0003CFD155 related cluster n=1 Tax=unknown RepID=UPI0003CFD155 rbh
Dehydrogenase {ECO:0000313|EMBL:ESZ73998.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_2725_29
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29395..30186
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUH7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV03341.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2725_30
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30203..31774
DNA (1572bp) protein (524aa)
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIX6_9RHIZ rbh
Amine oxidase {ECO:0000313|EMBL:CDX15192.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
amine oxidase rbh
Displaying items 1-30 of 32 in total

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