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SCNpilot_cont_500_bf_scaffold_501

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_501_1
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93..710
DNA (618bp) protein (206aa)
UPI0003CDFBB0 related cluster n=1 Tax=unknown RepID=UPI0003CDFBB0 rbh
Molybdenum cofactor sulfurase {ECO:0000313|EMBL:ESY68493.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_501_2

Not on your lists

comp(760..1899)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B77E7 rbh
Marine sediment metagenome DNA, contig: S01H1_C00692 {ECO:0000313|EMBL:GAF81188.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_500_bf_scaffold_501_3
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1928..3445)
DNA (1518bp) protein (506aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
sugar ABC transporter ATPase; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A0E43 rbh
SCNpilot_cont_500_bf_scaffold_501_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3540..4526)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037793BB rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EXG80652.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_501_5
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4551..5522)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000377E843 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDQ02045.1}; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
inner-membrane translocator; K10440 ribose transport system permease protein
SCNpilot_cont_500_bf_scaffold_501_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5755..6816
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F1A52
Putative Transcriptional regulator protein {ECO:0000313|EMBL:CDX12663.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_501_7
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6873..7187)
DNA (315bp) protein (105aa)
Mlr1592 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98K84_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX13309.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_501_8
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7184..7708)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036FDD4A
Uncharacterized UPF0066 family protein {ECO:0000313|EMBL:AID31011.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_501_9
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7961..8980
DNA (1020bp) protein (340aa)
UPI0003CF8F73 related cluster n=1 Tax=unknown RepID=UPI0003CF8F73 rbh
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESY79715.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
ArsR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_501_10
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8980..9897
DNA (918bp) protein (306aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] rbh
UPI0003D06AD1 related cluster n=1 Tax=unknown RepID=UPI0003D06AD1 rbh
SCNpilot_cont_500_bf_scaffold_501_11
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10311..11231)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TF32_MESCW rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX29666.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_501_12
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11439..12659
DNA (1221bp) protein (407aa)
ornithine decarboxylase; K01581 ornithine decarboxylase [EC:4.1.1.17] rbh
UPI0003CFB19F related cluster n=1 Tax=unknown RepID=UPI0003CFB19F rbh
Ornithine decarboxylase {ECO:0000313|EMBL:ESZ23558.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_cont_500_bf_scaffold_501_13
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12711..13133)
DNA (423bp) protein (141aa)
UPI0003CEDAAA related cluster n=1 Tax=unknown RepID=UPI0003CEDAAA
Uncharacterized protein {ECO:0000313|EMBL:ESW65578.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_500_bf_scaffold_501_14
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13186..13569)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEU9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH09759.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_500_bf_scaffold_501_15
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13594..14766)
DNA (1173bp) protein (391aa)
Lytic murein transglycosylase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TF34_MESCW rbh
Putative transglycolase {ECO:0000313|EMBL:CDX29660.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
lytic murein transglycosylase rbh
SCNpilot_cont_500_bf_scaffold_501_16
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15031..15819)
DNA (789bp) protein (263aa)
UPI0003D06201 related cluster n=1 Tax=unknown RepID=UPI0003D06201 rbh
Glycoside hydrolase {ECO:0000313|EMBL:ESZ01704.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
lysozyme M1 (1,4-beta-N-acetylmuramidase) rbh
SCNpilot_cont_500_bf_scaffold_501_17
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16140..17519
DNA (1380bp) protein (460aa)
6-aminohexanoate-dimer hydrolase n=1 Tax=Rhizobium loti RepID=UPI00037E87EB rbh
Beta-lactamase family protein {ECO:0000313|EMBL:AID31001.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
beta-lactamase rbh
SCNpilot_cont_500_bf_scaffold_501_18

Not on your lists

17621..18244
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0Z2Z5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD42321.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_501_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18264..18923)
DNA (660bp) protein (220aa)
UPI0003CDFDFE related cluster n=1 Tax=unknown RepID=UPI0003CDFDFE rbh
Type 11 methyltransferase {ECO:0000313|EMBL:CDX59543.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
methylase involved in ubiquinone/menaquinone biosynthesis rbh
SCNpilot_cont_500_bf_scaffold_501_20
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18920..20167)
DNA (1248bp) protein (416aa)
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEV4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX29649.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein; K13622 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase rbh
SCNpilot_cont_500_bf_scaffold_501_21
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20262..23921)
DNA (3660bp) protein (1220aa)
5-oxoprolinase {ECO:0000313|EMBL:CDX13282.1}; EC=3.5.2.9 {ECO:0000313|EMBL:CDX13282.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
5-oxoprolinase (EC:3.5.2.9); K01469 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] rbh
5-oxoprolinase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEV5_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_501_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24170..24370
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEV6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX26962.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_501_23
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24522..25241
DNA (720bp) protein (240aa)
DnaJ-like protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98KA1_RHILO rbh
DnaJ-like protein; K05801 DnaJ like chaperone protein rbh
DnaJ-like protein {ECO:0000313|EMBL:BAB48913.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_501_24
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25238..25987
DNA (750bp) protein (250aa)
hypothetical protein; K01447 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] rbh
Mll1570 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98KA2_RHILO rbh
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:AID30995.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_501_25
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26171..26857
DNA (687bp) protein (229aa)
UPI0003CE111D related cluster n=1 Tax=unknown RepID=UPI0003CE111D rbh
Lytic transglycosylase catalytic {ECO:0000313|EMBL:CDX29631.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
lytic transglycosylase catalytic subunit rbh
SCNpilot_cont_500_bf_scaffold_501_26
unknown

Not on your lists

comp(27318..28829)
DNA (1512bp) protein (504aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_501_27
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28916..30031)
DNA (1116bp) protein (372aa)
Cystathionine gamma-lyase {ECO:0000313|EMBL:ESX45301.1}; EC=4.4.1.1 {ECO:0000313|EMBL:ESX45301.1};; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
Cystathionine gamma-lyase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GEA6_9RHIZ rbh
Cys/Met metabolism pyridoxal-phosphate-dependent protein rbh
SCNpilot_cont_500_bf_scaffold_501_28
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30634..31092
DNA (459bp) protein (153aa)
UPI0003CED286 related cluster n=1 Tax=unknown RepID=UPI0003CED286 rbh
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
cell division protein MraZ; K03925 MraZ protein
SCNpilot_cont_500_bf_scaffold_501_29
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31089..32120
DNA (1032bp) protein (344aa)
S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] rbh
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YEU2_MESOW rbh
SCNpilot_cont_500_bf_scaffold_501_30
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32125..32502
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FF85_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX30136.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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