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SCNpilot_cont_500_bf_scaffold_521

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_521_1
unknown

Not on your lists

1..66
DNA (66bp) protein (22aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_521_2
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(815..1534)
DNA (720bp) protein (240aa)
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y273_MESOW rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:AEH87189.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_521_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1534..2472)
DNA (939bp) protein (313aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y272_MESOW rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:CDX32733.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
polar amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_521_4
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2559..3416)
DNA (858bp) protein (286aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KM57_MESAW rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:CDX32736.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
periplasmic component of amino acid ABC-type transporter/signal transduction system rbh
SCNpilot_cont_500_bf_scaffold_521_5
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3579..4616)
DNA (1038bp) protein (346aa)
2OG-Fe(II) oxygenase n=1 Tax=Rhizobium loti RepID=UPI000366B7DB rbh
2OG-Fe(II) oxygenase superfamily protein {ECO:0000313|EMBL:AID28337.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
dioxygenase, isopenicillin N synthase rbh
SCNpilot_cont_500_bf_scaffold_521_6
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4855..5799
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036980C3 rbh
Inosine-uridine preferring nucleoside hydrolase family protein {ECO:0000313|EMBL:AID28336.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
Inosine/uridine-preferring nucleoside hydrolase rbh
SCNpilot_cont_500_bf_scaffold_521_7
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5947..6531
DNA (585bp) protein (195aa)
Regulatory protein TetR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNC1_MESCW rbh
TetR family transcriptional regulator rbh
Regulatory protein TetR {ECO:0000313|EMBL:ADV11679.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_521_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6776..10561
DNA (3786bp) protein (1262aa)
metH; B12-dependent methionine synthase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] rbh
B12-dependent methionine synthase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HX96_9RHIZ rbh
Methionine synthase {ECO:0000313|EMBL:EZQ17703.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_500_bf_scaffold_521_9
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(10616..11722)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYM2_RUBXD
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
SCNpilot_cont_500_bf_scaffold_521_10
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11828..12871
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036F0C1A
LacI family transcription regulator protein; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
LacI family transcription regulator protein {ECO:0000313|EMBL:ADJ63422.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
SCNpilot_cont_500_bf_scaffold_521_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12945..13598)
DNA (654bp) protein (218aa)
Amino acid ABC transporter, permease component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQX2_AZOBR
amino acid ABC transporter, permease component
Amino acid ABC transporter, permease component {ECO:0000313|EMBL:CCC99833.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_500_bf_scaffold_521_12
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13595..14260)
DNA (666bp) protein (222aa)
Amino acid ABC transporter, permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HW93_AZOC5
ABC transporter permease {ECO:0000313|EMBL:KJR62758.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_521_13
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14350..15126
DNA (777bp) protein (259aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003650F0E
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:AEH84989.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_521_14
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15296..16294
DNA (999bp) protein (333aa)
LacI family transcriptional regulator n=1 Tax=Brevibacillus sp. phR RepID=UPI00030C629D
D-ribose transporter subunit RbsB {ECO:0000313|EMBL:KDB02138.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
monosaccharide ABC transporter substrate-binding protein, cut2 family; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_521_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16339..17904
DNA (1566bp) protein (522aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
frcA; ABC transporter ATPase (EC:3.6.3.-); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
hypothetical protein n=1 Tax=Nocardiopsis prasina RepID=UPI000344CE06
SCNpilot_cont_500_bf_scaffold_521_16
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17901..19886
DNA (1986bp) protein (662aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034C2C5D
ABC transporter permease {ECO:0000313|EMBL:KHJ54081.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
ribose ABC transport system
SCNpilot_cont_500_bf_scaffold_521_17
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

19883..20983
DNA (1101bp) protein (367aa)
oxidoreductase n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037855A6
putative oxidoreductase
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
SCNpilot_cont_500_bf_scaffold_521_18
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

20980..22152
DNA (1173bp) protein (391aa)
mandelate racemase/muconate lactonizing protein; K01684 galactonate dehydratase [EC:4.2.1.6]
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Saccharomonospora glauca K62 RepID=I1D7W5_9PSEU rbh
Tax=RBG_16_Chloroflexi_54_18_curated
SCNpilot_cont_500_bf_scaffold_521_19
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22195..23250)
DNA (1056bp) protein (352aa)
choloylglycine hydrolase; K01442 choloylglycine hydrolase [EC:3.5.1.24] rbh
Choloylglycine hydrolase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTS2_HYPDA rbh
Choloylglycine hydrolase {ECO:0000313|EMBL:ADJ22634.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_500_bf_scaffold_521_20
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23390..24847
DNA (1458bp) protein (486aa)
Prolidase {ECO:0000313|EMBL:EGF94622.1}; EC=3.4.13.9 {ECO:0000313|EMBL:EGF94622.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Prolidase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXX8_BREDI rbh
amidohydrolase
SCNpilot_cont_500_bf_scaffold_521_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24859..25701
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E3EFB rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR77353.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_521_22
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25906..26361)
DNA (456bp) protein (152aa)
Transcriptional regulatory protein rosAr n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FCG7_9RHIZ
Transcriptional regulatory protein rosAr {ECO:0000313|EMBL:CCV13863.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transcriptional regulatory protein
SCNpilot_cont_500_bf_scaffold_521_23
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26547..29123)
DNA (2577bp) protein (859aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
UvrD-like helicase IV; K03658 DNA helicase IV [EC:3.6.4.12] rbh
Putative Helicase IV n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F9E6_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_521_24
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29641..30264
DNA (624bp) protein (208aa)
UPI0003CDF2FF related cluster n=1 Tax=unknown RepID=UPI0003CDF2FF rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ50856.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_521_25
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30293..31744)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFL5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AHK71403.1}; TaxID=1288313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans DSM 3504.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_521_26
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31698..34241)
DNA (2544bp) protein (848aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SIS3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AHK71402.1}; TaxID=1288313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans DSM 3504.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_521_27
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34515..35540
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1JWX4_BURCC
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
SCNpilot_cont_500_bf_scaffold_521_28
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35747..36124
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VIG3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ18792.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
SCNpilot_cont_500_bf_scaffold_521_29
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

36124..37260
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q0S5_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
SCNpilot_cont_500_bf_scaffold_521_30
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37386..38576
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00030802DD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH89159.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Displaying items 1-30 of 40 in total

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