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SCNpilot_cont_500_bf_scaffold_752

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_752_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(150..1928)
DNA (1779bp) protein (593aa)
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:ADB51176.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ADB51176.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Gamma-glutamyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9W4_CONWI rbh
SCNpilot_cont_500_bf_scaffold_752_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1939..2718)
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAM6_CONWI
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB51189.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_500_bf_scaffold_752_3
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2732..3736)
DNA (1005bp) protein (335aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] rbh
Transketolase central region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAM7_CONWI rbh
Pyruvate dehydrogenase {ECO:0000313|EMBL:AJE44307.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
SCNpilot_cont_500_bf_scaffold_752_4
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3736..4695)
DNA (960bp) protein (320aa)
dehydrogenase E1 component; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] rbh
Dehydrogenase E1 component n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAM8_CONWI rbh
Uncharacterized protein {ECO:0000313|EMBL:AJE44308.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
SCNpilot_cont_500_bf_scaffold_752_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4728..5162)
DNA (435bp) protein (145aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAM9_CONWI
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB51192.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_500_bf_scaffold_752_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5172..6194)
DNA (1023bp) protein (341aa)
Cobalamin synthesis protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EY14_9RHIZ
Cobalamin synthesis protein {ECO:0000313|EMBL:EYR82210.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cobalamin synthesis protein P47K
SCNpilot_cont_500_bf_scaffold_752_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6191..7642)
DNA (1452bp) protein (484aa)
Metal-dependent amidase/aminoacylase/carboxypeptidase n=1 Tax=Rhizobium sp. CF142 RepID=J2L0G2_9RHIZ rbh
Metal-dependent amidase/aminoacylase/carboxypeptidase {ECO:0000313|EMBL:EJJ26957.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
amidohydrolase
SCNpilot_cont_500_bf_scaffold_752_8
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7671..8351
DNA (681bp) protein (227aa)
Transcriptional regulator n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C6N7_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM77489.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_752_9
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8423..9259
DNA (837bp) protein (279aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0J7B6_9PSED
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ50253.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
putative polar amino acid ABC transporter, substrate-binding protein
SCNpilot_cont_500_bf_scaffold_752_10
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9438..10214
DNA (777bp) protein (259aa)
Putative permease component of ABC transporter n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9ZBL4_STRSW
ABC transporter permease; K02029 polar amino acid transport system permease protein
Putative permease component of ABC transporter {ECO:0000313|EMBL:CBG68709.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
SCNpilot_cont_500_bf_scaffold_752_11
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

10224..10991
DNA (768bp) protein (256aa)
ABC transporter n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI00035DE46B
arginine/ornithine transport ATP-binding protein
Tax=RBG_16_Chloroflexi_64_32_curated
SCNpilot_cont_500_bf_scaffold_752_12
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11196..12197
DNA (1002bp) protein (334aa)
tryptophanyl-tRNA synthetase II; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] rbh
Tryptophanyl-tRNA synthetase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVP3_PARL1 rbh
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:KFL27506.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_cont_500_bf_scaffold_752_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12212..13855)
DNA (1644bp) protein (548aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IMT0_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_cont_500_bf_scaffold_752_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14054..14821)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003693F24
Taurine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX13721.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
binding-protein-dependent transport system inner membrane protein; K15552 taurine transport system permease protein
SCNpilot_cont_500_bf_scaffold_752_15
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14843..15664)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002F93C2C
taurine ABC transporter permease; K02050 NitT/TauT family transport system permease protein
Taurine transport system permease protein TauC {ECO:0000313|EMBL:CDL90824.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
SCNpilot_cont_500_bf_scaffold_752_16
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15775..16803)
DNA (1029bp) protein (343aa)
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Frankia sp. CN3 RepID=G6HFU5_9ACTO
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETD30629.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
lipoprotein
SCNpilot_cont_500_bf_scaffold_752_17
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16820..17581)
DNA (762bp) protein (254aa)
ABC transporter; K10831 taurine transport system ATP-binding protein [EC:3.6.3.36]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361B323
Taurine transport ATP-binding protein TauB {ECO:0000313|EMBL:CDS48646.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
SCNpilot_cont_500_bf_scaffold_752_18
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17707..19053)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6K4S9_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KJC48798.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_752_19
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19117..20625)
DNA (1509bp) protein (503aa)
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:EKX60371.1}; EC=1.2.1.- {ECO:0000313|EMBL:EKX60371.1};; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
aldehyde dehydrogenase (EC:1.2.1.3); K00146 phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KHV1_9ACTO
SCNpilot_cont_500_bf_scaffold_752_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20633..21037)
DNA (405bp) protein (135aa)
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CKG8_RHILT
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein {ECO:0000313|EMBL:EJC84197.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
SCNpilot_cont_500_bf_scaffold_752_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21034..21954)
DNA (921bp) protein (307aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Rhizobium leguminosarum RepID=UPI000381649D rbh
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:EJC84198.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
SCNpilot_cont_500_bf_scaffold_752_22
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22118..22822
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00030B0A8A rbh
Transcriptional regulator {ECO:0000313|EMBL:EJC84199.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_752_23
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22868..23455)
DNA (588bp) protein (196aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CWB7_RHILT rbh
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EJC84200.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
SCNpilot_cont_500_bf_scaffold_752_24
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23866..25368)
DNA (1503bp) protein (501aa)
FAD dependent oxidoreductase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VJN1_RHOPX
Putative monooxygenase {ECO:0000313|EMBL:GAK45756.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
FAD dependent oxidoreductase
SCNpilot_cont_500_bf_scaffold_752_25
Arthrobacter aurescens, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25425..26756)
DNA (1332bp) protein (444aa)
ipuC; gamma-glutamylisopropylamide synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1YLU7_9MICC
Gamma-glutamylisopropylamide synthetase {ECO:0000313|EMBL:ABM10616.1}; TaxID=290340 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter aurescens (strain TC1).;"
SCNpilot_cont_500_bf_scaffold_752_26
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26758..27555)
DNA (798bp) protein (266aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J9G6_HYPSM rbh
Binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCB63647.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_500_bf_scaffold_752_27
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27565..28485)
DNA (921bp) protein (307aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J9G5_HYPSM rbh
Binding-protein-dependent transport systems inner membrane component rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCB63646.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_500_bf_scaffold_752_28
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28488..29576)
DNA (1089bp) protein (363aa)
potA; Spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31) rbh
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:CCB63645.1}; EC=3.6.3.31 {ECO:0000313|EMBL:CCB63645.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J9G4_HYPSM rbh
SCNpilot_cont_500_bf_scaffold_752_29
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29760..30830)
DNA (1071bp) protein (357aa)
Polyamine ABC transporter, periplasmic polyamine-binding protein PotD-4 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J9G3_HYPSM rbh
potD; polyamine ABC transporter periplasmic polyamine-binding protein PotD-4 rbh
Polyamine ABC transporter, periplasmic polyamine-binding protein PotD-4 {ECO:0000313|EMBL:CCB63644.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_500_bf_scaffold_752_30
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30811..31584)
DNA (774bp) protein (258aa)
GntR family transcriptional regulator n=1 Tax=Pseudomonas tolaasii RepID=UPI0002D40E04
Uncharacterized protein {ECO:0000313|EMBL:EQM71442.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
GntR family transcriptional regulator
Displaying items 1-30 of 38 in total

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