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SCNpilot_cont_500_bf_scaffold_797

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_797_1
unknown

Not on your lists

comp(1..672)
DNA (672bp) protein (224aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_797_2
unknown

Not on your lists

comp(1142..2659)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JFE8_OLICO
hypothetical protein
SCNpilot_cont_500_bf_scaffold_797_3
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3820..6786)
DNA (2967bp) protein (989aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LM
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] rbh
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y8I5_MESOW rbh
SCNpilot_cont_500_bf_scaffold_797_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6786..8270)
DNA (1485bp) protein (495aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Sensor protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EN66_9RHIZ rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_797_5
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8277..9005)
DNA (729bp) protein (243aa)
XRE family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00035D7637 rbh
response regulator receiver; K02483 two-component system, OmpR family, response regulator rbh
Response regulator receiver {ECO:0000313|EMBL:ADV13978.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_797_6
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9312..10856)
DNA (1545bp) protein (515aa)
Protease Do n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y349_9RHIZ rbh
Protease Do {ECO:0000313|EMBL:EHH13843.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
protease Do rbh
SCNpilot_cont_500_bf_scaffold_797_7
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11114..11608)
DNA (495bp) protein (165aa)
Cytochrome C-type biogenesis protein CycL n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985G0_RHILO
cytochrome C-type biogenesis protein CycL; K02200 cytochrome c-type biogenesis protein CcmH
Cytochrome C-type biogenesis protein CycL {ECO:0000313|EMBL:BAB54102.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_797_8
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11605..13596)
DNA (1992bp) protein (664aa)
Cytochrome c-type synthesis protein CycK n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985G1_RHILO rbh
Heme lyase, CcmF subunit {ECO:0000313|EMBL:CDX41681.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
cytochrome C biosynthesis protein CycK; K02198 cytochrome c-type biogenesis protein CcmF rbh
SCNpilot_cont_500_bf_scaffold_797_9
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13671..14114)
DNA (444bp) protein (148aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KTB3_MESAW
cytochrome c-type biogenesis protein CcmE
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCNpilot_cont_500_bf_scaffold_797_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14118..15248)
DNA (1131bp) protein (377aa)
Cytochrome c-type biogenesis protein CycH n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985G3_RHILO rbh
Cytochrome c-type biogenesis protein CcmI {ECO:0000313|EMBL:ETA72085.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
cytochrome C-type biogenesis protein cycH; K02200 cytochrome c-type biogenesis protein CcmH rbh
SCNpilot_cont_500_bf_scaffold_797_11
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15426..15866)
DNA (441bp) protein (147aa)
UPI0003CF6D2B related cluster n=1 Tax=unknown RepID=UPI0003CF6D2B
Uncharacterized protein {ECO:0000313|EMBL:ESY80053.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_797_12
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15976..17370)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
ATP-binding region ATPase domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMP0_MESCW rbh
ATPase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_797_13
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17393..18058)
DNA (666bp) protein (222aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KT41_MESAW rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGB47253.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_797_14
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18144..18446)
DNA (303bp) protein (101aa)
UPI0003D06DDF related cluster n=1 Tax=unknown RepID=UPI0003D06DDF
Uncharacterized protein {ECO:0000313|EMBL:ESZ24123.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_797_15
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18612..19028)
DNA (417bp) protein (139aa)
UPI0003CF0BAF related cluster n=1 Tax=unknown RepID=UPI0003CF0BAF
Uncharacterized protein {ECO:0000313|EMBL:ESY80057.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_797_16
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19106..19912)
DNA (807bp) protein (269aa)
UPI0003CF0AAD related cluster n=1 Tax=unknown RepID=UPI0003CF0AAD rbh
Polyamine ABC transporter permease {ECO:0000313|EMBL:ESY80059.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_797_17
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19912..20745)
DNA (834bp) protein (278aa)
ABC transporter, permease protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985H1_RHILO rbh
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:ETA72077.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_797_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20866..21981)
DNA (1116bp) protein (372aa)
Extracellular solute-binding protein family 1 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y8K2_MESOW rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDX26584.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
family 1 extracellular solute-binding protein rbh
SCNpilot_cont_500_bf_scaffold_797_19
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22023..23114)
DNA (1092bp) protein (364aa)
UPI0003CFF24F related cluster n=1 Tax=unknown RepID=UPI0003CFF24F rbh
Spermidine/putrescine ABC transporter {ECO:0000313|EMBL:ESZ19779.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ABC-type spermidine/putrescine transport system, ATPase component rbh
SCNpilot_cont_500_bf_scaffold_797_20
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23300..24196)
DNA (897bp) protein (299aa)
Transcriptional regulator n=4 Tax=Mesorhizobium RepID=V7EYD2_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:ESZ71457.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_797_21
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24292..25872
DNA (1581bp) protein (527aa)
metal-dependent amidase/aminoacylase/carboxypeptidase n=1 Tax=Rhizobium loti RepID=UPI00037F7B45 rbh
metal-dependent amidase/aminoacylase/carboxypeptidase rbh
Metal-dependent amidase/aminoacylase/carboxypeptidase {ECO:0000313|EMBL:AGB47262.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_797_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25910..26710
DNA (801bp) protein (267aa)
Amidinotransferase n=2 Tax=Mesorhizobium RepID=V7GH31_9RHIZ rbh
Amidinotransferase {ECO:0000313|EMBL:CDX41178.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
amidinotransferase rbh
SCNpilot_cont_500_bf_scaffold_797_23
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26792..27619)
DNA (828bp) protein (276aa)
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI00037A76E4 rbh
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AID31435.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein
SCNpilot_cont_500_bf_scaffold_797_24
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27622..28899)
DNA (1278bp) protein (426aa)
Binding-protein dependent transport system inner membrane protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEF2_9RHIZ rbh
Binding-protein dependent transport system inner membrane protein {ECO:0000313|EMBL:EHH09883.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
spermidine/putrescine ABC transporter permease protein
SCNpilot_cont_500_bf_scaffold_797_25
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28907..29959)
DNA (1053bp) protein (351aa)
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Rhizobium loti RepID=UPI00035CE71A rbh
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:AID31433.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ABC transporter, substrate-binding protein
SCNpilot_cont_500_bf_scaffold_797_26
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30001..31110)
DNA (1110bp) protein (370aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
spermidine/putrescine ABC transporter ATPase n=1 Tax=Rhizobium loti RepID=UPI000370A02B rbh
polyamine ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_797_27
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31379..32803
DNA (1425bp) protein (475aa)
GntR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI0003649609 rbh
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:AID31431.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
Putative HTH-type transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_797_28
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32827..34068
DNA (1242bp) protein (414aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEF6_9RHIZ rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EHH09887.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_500_bf_scaffold_797_29
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34276..36444
DNA (2169bp) protein (723aa)
penicillin-binding protein, 1A family (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] rbh
penicillin-binding protein 1A n=1 Tax=Rhizobium loti RepID=UPI0003698901 rbh
Penicillin-binding protein 1A {ECO:0000313|EMBL:ESY80075.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_cont_500_bf_scaffold_797_30
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36941..37357
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6BAX6_RHILS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61234.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
Displaying items 1-30 of 64 in total

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