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SCNpilot_cont_500_bf_scaffold_888

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_888_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..880
DNA (879bp) protein (293aa)
UPI0003CF9707 related cluster n=1 Tax=unknown RepID=UPI0003CF9707
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:CDX16639.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
pentulose/hexulose kinase
SCNpilot_cont_500_bf_scaffold_888_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

916..1101
DNA (186bp) protein (62aa)
Mll5701 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98B73_RHILO
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:CDX16639.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
L-fuculokinase
SCNpilot_cont_500_bf_scaffold_888_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1139..2395)
DNA (1257bp) protein (419aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
D-amino acid dehydrogenase small subunit n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YFU5_9RHIZ rbh
glycine/D-amino acid oxidase, deaminating rbh
SCNpilot_cont_500_bf_scaffold_888_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2490..2873)
DNA (384bp) protein (128aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDX13653.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CDX13653.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UDP-galactose-4-epimerase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEB1_9RHIZ
UDP-glucose-4-epimerase
SCNpilot_cont_500_bf_scaffold_888_5
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

3071..3418
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY13928.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
SCNpilot_cont_500_bf_scaffold_888_6
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3613..4944
DNA (1332bp) protein (444aa)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
UPI0003CED16D related cluster n=1 Tax=unknown RepID=UPI0003CED16D rbh
7-keto-8-aminopelargonate synthetase-like enzyme rbh
SCNpilot_cont_500_bf_scaffold_888_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5088..6173)
DNA (1086bp) protein (362aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] rbh
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
branched-chain amino acid aminotransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030FE5C0 rbh
SCNpilot_cont_500_bf_scaffold_888_8
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6248..7414)
DNA (1167bp) protein (389aa)
Aspartate aminotransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FKD4_9RHIZ rbh
Aspartate aminotransferase {ECO:0000313|EMBL:ESX77746.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
class I and II aminotransferase rbh
SCNpilot_cont_500_bf_scaffold_888_9
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7605..8024)
DNA (420bp) protein (140aa)
large conductance mechanosensitive channel protein MscL n=1 Tax=Rhizobium loti RepID=UPI000375C263
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
mscL; large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
SCNpilot_cont_500_bf_scaffold_888_10
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8236..11727
DNA (3492bp) protein (1164aa)
UPI0003CFFB37 related cluster n=1 Tax=unknown RepID=UPI0003CFFB37 rbh
Histidine kinase {ECO:0000313|EMBL:ESZ21802.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
two-component sensor histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_888_11
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11757..12584)
DNA (828bp) protein (276aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z137_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:AHF77418.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_888_12
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12605..13267)
DNA (663bp) protein (221aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC52_SPISS
polar amino acid ABC transporter inner membrane protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADK79932.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCNpilot_cont_500_bf_scaffold_888_13
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13270..13941)
DNA (672bp) protein (224aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC51_SPISS
polar amino acid ABC transporter inner membrane protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADK79931.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCNpilot_cont_500_bf_scaffold_888_14
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13950..14681)
DNA (732bp) protein (244aa)
ABC transporter n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI00037FDFA0
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHA76553.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
Glutamate uptake system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_888_15
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14834..15745)
DNA (912bp) protein (304aa)
Extracellular solute-binding protein family 3 n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC49_SPISS
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADK79929.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCNpilot_cont_500_bf_scaffold_888_16
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15949..16848
DNA (900bp) protein (300aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Nitratireductor indicus C115 RepID=K2PAK6_9RHIZ
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:EKF44161.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
dihydrodipicolinate synthase
SCNpilot_cont_500_bf_scaffold_888_17
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16939..18129
DNA (1191bp) protein (397aa)
Putative aspartate transaminase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TQH6_TISMK rbh
aspC; putative aspartate transaminase rbh
Putative aspartate transaminase {ECO:0000313|EMBL:AFK55014.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_888_18
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18135..19832
DNA (1698bp) protein (566aa)
dihydroxyacetone kinase; K00863 dihydroxyacetone kinase [EC:2.7.1.29]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F030F2
Dihydroxyacetone kinase {ECO:0000313|EMBL:KJF72871.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
SCNpilot_cont_500_bf_scaffold_888_19
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19843..20502)
DNA (660bp) protein (220aa)
Glycerol metabolism activator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEB5_9RHIZ rbh
Glycerol metabolism activator {ECO:0000313|EMBL:CCV14706.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
two component LuxR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_888_20
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20621..21055)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y8S0_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH90931.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_888_21
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21212..21562
DNA (351bp) protein (117aa)
Dihydroorotate dehydrogenase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GJT3_9RHIZ
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:ESY04105.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_888_22
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21559..22632
DNA (1074bp) protein (358aa)
dihydroorotate dehydrogenase 2 (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] rbh
Dihydroorotate dehydrogenase (quinone) {ECO:0000255|HAMAP-Rule:MF_00225}; EC=1.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000255|HAMAP-Rule:MF_00225}; Short=DHOD {ECO:0000255|HAMAP-Rule:MF_00225};; Short=DHODase {ECO:0000255|HAMAP-Rule:MF_00225};; Dihydroorotate oxidase {ECO:0000255|HAMAP-Rule:MF_00225}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=PYRD_RHILO rbh
SCNpilot_cont_500_bf_scaffold_888_23
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22625..23965)
DNA (1341bp) protein (447aa)
UPI0003CF0A28 related cluster n=1 Tax=unknown RepID=UPI0003CF0A28 rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:ESY74225.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
MATE efflux family protein rbh
SCNpilot_cont_500_bf_scaffold_888_24
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24072..24974
DNA (903bp) protein (301aa)
Deacetylase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YFT4_9RHIZ rbh
Deacetylase {ECO:0000313|EMBL:EHH09395.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
histone deacetylase rbh
SCNpilot_cont_500_bf_scaffold_888_25
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24990..25253)
DNA (264bp) protein (88aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHX7_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESW84040.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_888_26
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25347..26183)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361695F
Alpha (1-4)-galactosyltransferase {ECO:0000313|EMBL:CDX17435.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
lgt5; galactosyltransferase Lgt5
SCNpilot_cont_500_bf_scaffold_888_27
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26180..27115)
DNA (936bp) protein (312aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX33950.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_cont_500_bf_scaffold_888_28
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

27418..28515
DNA (1098bp) protein (366aa)
Radical SAM domain protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7K6S1_CYAP7 rbh
Radical SAM domain protein {ECO:0000313|EMBL:GAN33095.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
radical SAM protein rbh
SCNpilot_cont_500_bf_scaffold_888_29
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28944..29555
DNA (612bp) protein (204aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI00035CC294
Putative outer-membrane immunogenic protein {ECO:0000313|EMBL:AID27915.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_888_30
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29881..30270
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TKQ9_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV14973.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Displaying items 1-30 of 64 in total

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