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SCNpilot_cont_500_bf_scaffold_933

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_933_1
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..383
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGD3_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX42127.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_933_2
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(391..1311)
DNA (921bp) protein (307aa)
UPI0003CFC964 related cluster n=1 Tax=unknown RepID=UPI0003CFC964 rbh
Transcriptional regulator {ECO:0000313|EMBL:ESZ26211.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_933_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1451..1696
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6U3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12503.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_933_4
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2868..3551
DNA (684bp) protein (228aa)
Transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FCQ0_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:ESX67281.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
response regulator receiver rbh
SCNpilot_cont_500_bf_scaffold_933_5
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3675..4130
DNA (456bp) protein (152aa)
UPI0003CDE0FC related cluster n=1 Tax=unknown RepID=UPI0003CDE0FC
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:AID33260.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_933_6
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4231..5037)
DNA (807bp) protein (269aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
UPI0003CE7A9B related cluster n=1 Tax=unknown RepID=UPI0003CE7A9B rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:ESX97829.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
SCNpilot_cont_500_bf_scaffold_933_7
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6042..8684)
DNA (2643bp) protein (881aa)
DNA translocase ftsK n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3C3_9RHIZ rbh
DNA translocase ftsK {ECO:0000313|EMBL:CCV10678.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family rbh
SCNpilot_cont_500_bf_scaffold_933_8
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8891..9166)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000382C152
Uncharacterized protein {ECO:0000313|EMBL:AID33266.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_933_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9482..10831)
DNA (1350bp) protein (450aa)
Ammonium transporter AmtB n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EH1_RHILO rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ammonium transporter; K03320 ammonium transporter, Amt family rbh
SCNpilot_cont_500_bf_scaffold_933_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10863..11168)
DNA (306bp) protein (102aa)
Nitrogen regulatory protein P-II n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TIZ8_MESCW
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ADV10194.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_933_11
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11473..12330)
DNA (858bp) protein (286aa)
UPI0003CE1D07 related cluster n=1 Tax=unknown RepID=UPI0003CE1D07 rbh
acyl-CoA thioesterase II rbh
Acyl-CoA thioesterase {ECO:0000313|EMBL:ESY94250.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCNpilot_cont_500_bf_scaffold_933_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12513..13772
DNA (1260bp) protein (420aa)
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] rbh
2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Rhizobium loti RepID=UPI000367AA7E rbh
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein {ECO:0000313|EMBL:AID33271.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_933_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13983..14513)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037A6AEF
Uncharacterized protein {ECO:0000313|EMBL:CDX22839.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_933_14
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14628..14984)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGR3_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB43574.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_933_15
unknown

Not on your lists

comp(14988..15188)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_933_16
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15376..15849
DNA (474bp) protein (158aa)
Cytochrome B561 n=1 Tax=Nitratireductor indicus C115 RepID=K2PGQ6_9RHIZ
Membrane protein {ECO:0000313|EMBL:EZQ14946.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
cytochrome B561; K12262 cytochrome b561
SCNpilot_cont_500_bf_scaffold_933_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16399..17415)
DNA (1017bp) protein (339aa)
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TIZ1_MESCW rbh
AraC type helix-turn-helix-domain containing protein rbh
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ADV10187.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_933_18
unknown

Not on your lists

17613..17768
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_933_19
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17839..18468)
DNA (630bp) protein (210aa)
UPF0502 protein MESS4_230025 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3B2_9RHIZ rbh
UPF0502 protein MPLA_480009 {ECO:0000256|HAMAP-Rule:MF_01584}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein; K09915 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_933_20
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18465..19274)
DNA (810bp) protein (270aa)
Nucleotidyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FAY5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX41987.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein; K07074 rbh
SCNpilot_cont_500_bf_scaffold_933_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19290..20069)
DNA (780bp) protein (260aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CE1A4B related cluster n=1 Tax=unknown RepID=UPI0003CE1A4B rbh
succinate dehydrogenase and fumarate reductase iron-sulfur protein rbh
SCNpilot_cont_500_bf_scaffold_933_22
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20069..20503)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9S3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX30545.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_933_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20506..22344)
DNA (1839bp) protein (613aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F2W8_9RHIZ rbh
succinate dehydrogenase, flavoprotein subunit rbh
SCNpilot_cont_500_bf_scaffold_933_24
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22349..22744)
DNA (396bp) protein (132aa)
Succinate dehydrogenase, hydrophobic membrane anchor protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EK55_9RHIZ
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:CCV04483.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
succinate dehydrogenase, hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit
SCNpilot_cont_500_bf_scaffold_933_25
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22747..23166)
DNA (420bp) protein (140aa)
succinate dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000370D772
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:AID33284.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
succinate dehydrogenase membrane anchor subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
SCNpilot_cont_500_bf_scaffold_933_26
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23385..23792)
DNA (408bp) protein (136aa)
UPI0003CF7B8E related cluster n=1 Tax=unknown RepID=UPI0003CF7B8E
Uncharacterized protein {ECO:0000313|EMBL:ESW77647.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_933_27
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24024..24380
DNA (357bp) protein (119aa)
UPI0003D0611E related cluster n=1 Tax=unknown RepID=UPI0003D0611E
Uncharacterized protein {ECO:0000313|EMBL:ESZ26234.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_933_28
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24409..25599)
DNA (1191bp) protein (397aa)
Diguanylate cyclase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9R7_9RHIZ rbh
Diguanylate cyclase {ECO:0000313|EMBL:EHH11515.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_933_29
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25746..26942)
DNA (1197bp) protein (399aa)
UPI0003D06D0B related cluster n=1 Tax=unknown RepID=UPI0003D06D0B rbh
Diguanylate cyclase {ECO:0000313|EMBL:ESZ26236.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
diguanylate cyclase (GGDEF) domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_933_30
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27141..27962)
DNA (822bp) protein (274aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9R5_9RHIZ
Displaying items 1-30 of 63 in total

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