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SCNpilot_cont_500_bf_scaffold_1046

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1046_1
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(312..653)
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX30746.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_500_bf_scaffold_1046_2
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1024..1968
DNA (945bp) protein (315aa)
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_500_bf_scaffold_1046_3
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2039..2617)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETQ6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV07390.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1046_4
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2614..3732)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4N8_MESOW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEH88441.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1046_5
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3969..4109
DNA (141bp) protein (47aa)
Uncharacterized protein n=7 Tax=Mesorhizobium RepID=M5ET21_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESW88086.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1046_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4127..4297
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGB8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX25655.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1046_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4869..6278
DNA (1410bp) protein (470aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
hypothetical protein (EC:2.1.1.74); K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] rbh
tRNA (Uracil-5-)-methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FG94_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1046_8
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6281..6790
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TKD3_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV12632.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1046_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6808..7758)
DNA (951bp) protein (317aa)
C-5 sterol desaturase {ECO:0000313|EMBL:CDX25664.1}; EC=1.3.-.- {ECO:0000313|EMBL:CDX25664.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YD42_9RHIZ rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1046_10
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7758..8192)
DNA (435bp) protein (145aa)
UPI0003CEAF73 related cluster n=1 Tax=unknown RepID=UPI0003CEAF73
Uncharacterized protein {ECO:0000313|EMBL:ESY78732.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1046_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8277..9116)
DNA (840bp) protein (280aa)
hypothetical protein; K02291 phytoene synthase [EC:2.5.1.32] rbh
Mll1068 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98LD8_RHILO rbh
Squalene/phytoene synthase {ECO:0000313|EMBL:CDX12258.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_cont_500_bf_scaffold_1046_12
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9117..9509)
DNA (393bp) protein (131aa)
Membrane protein n=2 Tax=Mesorhizobium RepID=V7G672_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESZ72842.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
hypothetical protein; K09008 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1046_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9535..12084)
DNA (2550bp) protein (850aa)
Probable protein-export membrane protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98LD6_RHILO rbh
bifunctional preprotein translocase subunit SecD/SecF; K12257 SecD/SecF fusion protein rbh
Probable protein-export membrane protein {ECO:0000313|EMBL:BAB48527.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1046_14
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12136..12474)
DNA (339bp) protein (113aa)
SecYEG protein translocase auxillary subunit n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ET30_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESY74669.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
SCNpilot_cont_500_bf_scaffold_1046_15
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12616..13617
DNA (1002bp) protein (334aa)
ATPase AAA n=1 Tax=Rhizobium loti RepID=UPI00036AFCA4 rbh
hypothetical protein; K06923 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEH88429.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1046_16
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13773..15308)
DNA (1536bp) protein (512aa)
UPI0003CE3A0B related cluster n=1 Tax=unknown RepID=UPI0003CE3A0B rbh
Peptigoglycan-binding protein LysM {ECO:0000313|EMBL:ESW80238.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
metalloendopeptidase-like membrane protein rbh
SCNpilot_cont_500_bf_scaffold_1046_17
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15464..16123)
DNA (660bp) protein (220aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] rbh
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|RuleBase:RU003802}; EC=2.1.1.77 {ECO:0000256|RuleBase:RU003802};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4M2_MESOW rbh
SCNpilot_cont_500_bf_scaffold_1046_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16120..16878)
DNA (759bp) protein (253aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
surE; stationary phase survival protein SurE (EC:3.1.3.2); K03787 5'-nucleotidase [EC:3.1.3.5] rbh
5'-nucleotidase SurE n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YD32_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1046_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16878..18182)
DNA (1305bp) protein (435aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] rbh
UPI0003D04F91 related cluster n=1 Tax=unknown RepID=UPI0003D04F91 rbh
SCNpilot_cont_500_bf_scaffold_1046_20
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18478..19347)
DNA (870bp) protein (290aa)
Sec-independent protein translocase protein TatC n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98LC7_RHILO rbh
sec-independent protein translocase component; K03118 sec-independent protein translocase protein TatC rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1046_21
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19344..20069)
DNA (726bp) protein (242aa)
UPI0003CFCDC5 related cluster n=1 Tax=unknown RepID=UPI0003CFCDC5
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
twin-arginine translocation protein subunit TatB; K03117 sec-independent protein translocase protein TatB
SCNpilot_cont_500_bf_scaffold_1046_22
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20099..20317)
DNA (219bp) protein (73aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=TATA_RHILO
tatA; twin-arginine translocation protein TatA; K03116 sec-independent protein translocase protein TatA
Sec-independent protein translocase protein TatA {ECO:0000255|HAMAP-Rule:MF_00236}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1046_23
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20492..20929)
DNA (438bp) protein (146aa)
UPI0003CE8B6E related cluster n=1 Tax=unknown RepID=UPI0003CE8B6E
segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCNpilot_cont_500_bf_scaffold_1046_24
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20929..21183)
DNA (255bp) protein (85aa)
Chromosome segregation and condensation protein, ScpB n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4L6_MESOW
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1046_25
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21180..22022)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU39_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV07413.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein; K05896 segregation and condensation protein A rbh
SCNpilot_cont_500_bf_scaffold_1046_26
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22041..23060)
DNA (1020bp) protein (340aa)
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] rbh
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Glycoside hydrolase family 3 domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4L4_MESOW rbh
SCNpilot_cont_500_bf_scaffold_1046_27
unknown

Not on your lists

25089..25502
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1046_28
unknown

Not on your lists

25879..26403
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1046_29
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26459..28216)
DNA (1758bp) protein (586aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] rbh
Arginine--tRNA ligase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YD22_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1046_30
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28326..29555)
DNA (1230bp) protein (410aa)
deoxyguanosinetriphosphate triphosphohydrolase-like protein; K01129 dGTPase [EC:3.1.5.1] rbh
Deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGR6_9RHIZ rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
Displaying items 1-30 of 69 in total

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