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SCNpilot_cont_500_bf_scaffold_1088

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1088_1
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..157)
DNA (156bp) protein (52aa)
electron transfer flavoprotein subunit beta n=1 Tax=Hoeflea sp. 108 RepID=UPI000369449A
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:EZQ14421.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
electron transfer flavoprotein alpha/beta-subunit; K03521 electron transfer flavoprotein beta subunit
SCNpilot_cont_500_bf_scaffold_1088_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336..1133)
DNA (798bp) protein (266aa)
UPI0003CE3923 related cluster n=1 Tax=unknown RepID=UPI0003CE3923 rbh
Membrane protein {ECO:0000313|EMBL:ESY75204.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
rhomboid family protein rbh
SCNpilot_cont_500_bf_scaffold_1088_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1167..1748)
DNA (582bp) protein (194aa)
Mlr3485 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98G53_RHILO rbh
hypothetical protein rbh
Mlr3485 protein {ECO:0000313|EMBL:BAB50363.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1088_4
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1774..1965)
DNA (192bp) protein (64aa)
Hypoxia induced protein conserved region n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFH6_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX34086.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
Hypoxia induced protein conserved region
SCNpilot_cont_500_bf_scaffold_1088_5
unknown

Not on your lists

comp(1950..2165)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1088_6
unknown

Not on your lists

comp(2757..2894)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1088_7
unknown

Not on your lists

3197..3649
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1088_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4003..4296)
DNA (294bp) protein (98aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000313|EMBL:CDX14471.1}; EC=6.1.1.- {ECO:0000313|EMBL:CDX14471.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003CECACE related cluster n=1 Tax=unknown RepID=UPI0003CECACE
glutamyl-or glutaminyl-tRNA synthetase
SCNpilot_cont_500_bf_scaffold_1088_9
unknown

Not on your lists

4557..4916
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1088_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5014..5562
DNA (549bp) protein (183aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
HhH-GPD family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y371_MESOW
HhH-GPD family protein {ECO:0000313|EMBL:ADV10742.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1088_11
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5774..6331
DNA (558bp) protein (186aa)
HNH endonuclease n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y372_MESOW rbh
HNH endonuclease rbh
HNH endonuclease {ECO:0000313|EMBL:AEH86116.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1088_12
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6490..7008)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAJ5_MESCW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV10744.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1088_13
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7038..7625)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F4U6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV11341.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1088_trna_1
unknown

Not on your lists

7905..7986
DNA (82bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1088_14
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8126..8515
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0FZ04_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL73741.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_500_bf_scaffold_1088_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8579..9202)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U7W0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88644.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative periplasmic protein
SCNpilot_cont_500_bf_scaffold_1088_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9470..10699)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036C3FCC rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX24093.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1088_17
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10696..11529)
DNA (834bp) protein (278aa)
creatininase n=1 Tax=Rhizobium loti RepID=UPI00036623FF rbh
Creatinine amidohydrolase family protein {ECO:0000313|EMBL:AID32671.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1088_18
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11533..12810)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F5D8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV11358.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1088_19
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13236..14006)
DNA (771bp) protein (257aa)
Preprotein translocase subunit SecA n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FD78_9RHIZ
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
azi, div; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
SCNpilot_cont_500_bf_scaffold_1088_20
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13945..15885)
DNA (1941bp) protein (647aa)
preprotein translocase subunit SecA n=1 Tax=Rhizobium loti RepID=UPI00036AD04B
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
SCNpilot_cont_500_bf_scaffold_1088_21
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16135..17052
DNA (918bp) protein (306aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] rbh
UPI0003CE2FAE related cluster n=1 Tax=unknown RepID=UPI0003CE2FAE rbh
SCNpilot_cont_500_bf_scaffold_1088_22
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17119..18042)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F203_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV11367.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_500_bf_scaffold_1088_23
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18083..18682)
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F5E7_9RHIZ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCV11368.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1088_24
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18789..19034
DNA (246bp) protein (82aa)
UPI0003CDFC92 related cluster n=1 Tax=unknown RepID=UPI0003CDFC92
AfpU {ECO:0000313|EMBL:ESW82557.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1088_25
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19150..20391
DNA (1242bp) protein (414aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] rbh
UPI0003CDD0AB related cluster n=1 Tax=unknown RepID=UPI0003CDD0AB rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_cont_500_bf_scaffold_1088_26
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20403..21173
DNA (771bp) protein (257aa)
UPI0003CF620B related cluster n=1 Tax=unknown RepID=UPI0003CF620B rbh
Acetyltransferase {ECO:0000313|EMBL:ESY96567.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
acetyltransferase rbh
SCNpilot_cont_500_bf_scaffold_1088_27
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21170..21589
DNA (420bp) protein (140aa)
NTP pyrophosphohydrolase n=3 Tax=Mesorhizobium RepID=V7F018_9RHIZ
NTP pyrophosphohydrolase {ECO:0000313|EMBL:ESZ45604.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
mutator MutT protein
SCNpilot_cont_500_bf_scaffold_1088_28
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21728..22033
DNA (306bp) protein (102aa)
Mll3458 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98G75_RHILO
hypothetical protein
Mll3458 protein {ECO:0000313|EMBL:BAB50341.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1088_29
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22127..22309
DNA (183bp) protein (61aa)
UPI0003CE072E related cluster n=1 Tax=unknown RepID=UPI0003CE072E
PilA {ECO:0000313|EMBL:ESW82563.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
Flp pilus assembly protein, pilin Flp
Displaying items 1-30 of 54 in total

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