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SCNpilot_cont_500_bf_scaffold_1134

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1134_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..717
DNA (717bp) protein (239aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III alpha subunit n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ESN9_9RHIZ
SCNpilot_cont_500_bf_scaffold_1134_2
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

904..1281
DNA (378bp) protein (126aa)
Lactoylglutathione lyase family protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PTV3_9RHIZ
Lactoylglutathione lyase family protein
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:CDI08518.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_cont_500_bf_scaffold_1134_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1333..2214)
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8I0_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11932.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
DMT(drug/metabolite transporter) superfamily permease rbh
SCNpilot_cont_500_bf_scaffold_1134_4
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2412..2921
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIT3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX73162.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1134_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2981..4312)
DNA (1332bp) protein (444aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] rbh
DNA polymerase IV n=1 Tax=Rhizobium loti RepID=UPI00036BD838 rbh
SCNpilot_cont_500_bf_scaffold_1134_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4380..4955
DNA (576bp) protein (192aa)
UPI0003CF65BB related cluster n=1 Tax=unknown RepID=UPI0003CF65BB rbh
Acetyltransferase {ECO:0000313|EMBL:ESW77145.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
N-acetyltransferase GCN5 rbh
SCNpilot_cont_500_bf_scaffold_1134_7
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5064..6578
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TD24_MESCW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV13272.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1134_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6724..7377)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAA2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV14202.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1134_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7374..7673)
DNA (300bp) protein (100aa)
Mlr0862 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98LV4_RHILO
hypothetical protein
Mlr0862 protein {ECO:0000313|EMBL:BAB48359.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1134_10
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7863..8279
DNA (417bp) protein (139aa)
chemotaxis protein CheY n=1 Tax=Rhizobium loti RepID=UPI00035D868A
response regulator receiver protein; K11443 two-component system, cell cycle response regulator DivK
Response regulator receiver protein {ECO:0000313|EMBL:AEH88528.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1134_11
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8311..9678
DNA (1368bp) protein (456aa)
UPI0003CE9DBC related cluster n=1 Tax=unknown RepID=UPI0003CE9DBC rbh
response regulator receiver modulated diguanylate cyclase rbh
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:AEH88529.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1134_12
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10251..10985
DNA (735bp) protein (245aa)
UPI0003CF7F03 related cluster n=1 Tax=unknown RepID=UPI0003CF7F03 rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:ESY85378.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_1134_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10982..12169
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036E89A0 rbh
hypothetical protein rbh
Methionine gamma lyase {ECO:0000313|EMBL:BAB48354.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1134_14
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12199..13476
DNA (1278bp) protein (426aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KM64_MESAW rbh
ABC-type sugar transport system, periplasmic component rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AGB46211.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_1134_15
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13652..14575
DNA (924bp) protein (308aa)
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI00037B9DD6 rbh
ABC transporter permease {ECO:0000313|EMBL:ESY71080.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1134_16
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14575..15423
DNA (849bp) protein (283aa)
ABC transporter permease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FG53_9RHIZ rbh
ABC transporter permease {ECO:0000313|EMBL:ESX73151.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1134_17
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15428..16495
DNA (1068bp) protein (356aa)
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5Y0_MESOW rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:AEH88536.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1134_18
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16577..16744)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=14 Tax=Mesorhizobium RepID=RL33_RHILO
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_500_bf_scaffold_1134_19
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16870..17334)
DNA (465bp) protein (155aa)
UPI0003D03FAA related cluster n=1 Tax=unknown RepID=UPI0003D03FAA
Uncharacterized protein {ECO:0000313|EMBL:ESZ27966.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1134_20
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17480..18655)
DNA (1176bp) protein (392aa)
Multidrug ABC transporter ATPase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIR8_9RHIZ rbh
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:ESX73147.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_1134_21
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18675..19412)
DNA (738bp) protein (246aa)
NUDIX hydrolase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TC62_MESCW rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:ADV13255.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1134_22
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19485..19919)
DNA (435bp) protein (145aa)
UPI0003CEC8E8 related cluster n=1 Tax=unknown RepID=UPI0003CEC8E8
Uncharacterized protein {ECO:0000313|EMBL:ESW77129.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1134_23
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19923..22238)
DNA (2316bp) protein (772aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] rbh
ribonuclease R n=1 Tax=Rhizobium loti RepID=UPI00036991F9 rbh
SCNpilot_cont_500_bf_scaffold_1134_24
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22245..24827)
DNA (2583bp) protein (861aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] rbh
DNA topoisomerase 1 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8J6_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1134_25
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25109..25498)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036CD4CF
Uncharacterized protein {ECO:0000313|EMBL:AID30329.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1134_26
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25574..26320
DNA (747bp) protein (249aa)
Cytochrome c biogenesis protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQD3_MESAW rbh
cytochrome c biogenesis protein rbh
Cytochrome c biogenesis protein {ECO:0000313|EMBL:AGB46224.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_1134_27
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26454..27020
DNA (567bp) protein (189aa)
UPI0003CFA978 related cluster n=1 Tax=unknown RepID=UPI0003CFA978
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
Displaying 27 items

View Taxonomy