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SCNpilot_cont_500_bf_scaffold_1408

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1408_1
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)
UPI0003CF2B13 related cluster n=1 Tax=unknown RepID=UPI0003CF2B13
Isochorismatase hydrolase {ECO:0000313|EMBL:ESZ07653.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1408_2
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(438..1646)
DNA (1209bp) protein (403aa)
Peptidase M24 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TGR9_MESCW rbh
peptidase M24 rbh
Peptidase M24 {ECO:0000313|EMBL:ADV10005.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1408_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1962..2933)
DNA (972bp) protein (324aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDG5_MESAW rbh
Transcriptional regulator {ECO:0000313|EMBL:CDX24753.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain rbh
SCNpilot_cont_500_bf_scaffold_1408_4
unknown

Not on your lists

3291..3980
DNA (690bp) protein (230aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1408_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4101..5270)
DNA (1170bp) protein (390aa)
Cystathionine gamma-synthase, PLP-dependent {ECO:0000313|EMBL:CDX63075.1}; EC=2.5.1.48 {ECO:0000313|EMBL:CDX63075.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cystathionine gamma-synthase; K01758 cystathionine gamma-lyase [EC:4.4.1.1] rbh
UPI0003CE0969 related cluster n=1 Tax=unknown RepID=UPI0003CE0969 rbh
SCNpilot_cont_500_bf_scaffold_1408_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5267..6709)
DNA (1443bp) protein (481aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] rbh
Cystathionine beta-synthase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98DX5_RHILO rbh
Cystathionine beta-synthase {ECO:0000313|EMBL:CDX63073.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_500_bf_scaffold_1408_7
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6897..8240)
DNA (1344bp) protein (448aa)
UPI0003CE5919 related cluster n=1 Tax=unknown RepID=UPI0003CE5919 rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDX13712.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1408_8
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8532..8717)
DNA (186bp) protein (62aa)
UPI0003CFFF28 related cluster n=1 Tax=unknown RepID=UPI0003CFFF28
Uncharacterized protein {ECO:0000313|EMBL:ESZ40772.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1408_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9027..9398
DNA (372bp) protein (124aa)
Rare lipoprotein A n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98DT8_RHILO
rare lipoprotein A; K03642 rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:BAB51182.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1408_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9769..11046
DNA (1278bp) protein (426aa)
intracellular PHB depolymerase; K05973 poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] rbh
Intracellular PHB depolymerase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98DT9_RHILO rbh
Intracellular PHB depolymerase {ECO:0000313|EMBL:BAB51181.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1408_11
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11290..11904
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHU7_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH07184.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1408_12
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12207..12413
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TGT7_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV10023.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1408_13
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12501..12869)
DNA (369bp) protein (123aa)
UPI0003CE6C0B related cluster n=1 Tax=unknown RepID=UPI0003CE6C0B
XRE family transcriptional regulator {ECO:0000313|EMBL:ESY76733.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1408_14
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12866..13399)
DNA (534bp) protein (178aa)
UPI0003CDFB50 related cluster n=1 Tax=unknown RepID=UPI0003CDFB50
DNA mismatch repair protein MutS {ECO:0000313|EMBL:ESY62699.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
Smr protein/MutS2
SCNpilot_cont_500_bf_scaffold_1408_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13396..14502)
DNA (1107bp) protein (369aa)
MltA domain-containing protein; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-] rbh
MltA domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHU3_9RHIZ rbh
Outer membrane lipoprotein GNA33, membrane-bound lytic murein transglycosylase {ECO:0000313|EMBL:CDX37342.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_500_bf_scaffold_1408_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14662..15369)
DNA (708bp) protein (236aa)
UPI0003D06C96 related cluster n=1 Tax=unknown RepID=UPI0003D06C96 rbh
Calcium-binding protein {ECO:0000313|EMBL:ESZ23160.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
import inner membrane translocase subunit Tim44 rbh
SCNpilot_cont_500_bf_scaffold_1408_17
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15562..16062
DNA (501bp) protein (167aa)
UPI0003CF4561 related cluster n=1 Tax=unknown RepID=UPI0003CF4561
Exclusion suppressor FxsA {ECO:0000313|EMBL:ESY62702.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
FxsA cytoplasmic membrane protein; K07113 UPF0716 protein FxsA
SCNpilot_cont_500_bf_scaffold_1408_18
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16154..16654
DNA (501bp) protein (167aa)
UPI0003CF4870 related cluster n=1 Tax=unknown RepID=UPI0003CF4870 rbh
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB rbh
SCNpilot_cont_500_bf_scaffold_1408_19
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16864..17625
DNA (762bp) protein (254aa)
Regulatory protein Crp n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TP23_MESCW rbh
Putative transcriptional activator {ECO:0000313|EMBL:CDX27457.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
regulatory protein crp; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein rbh
SCNpilot_cont_500_bf_scaffold_1408_20
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17655..18131)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KLG0_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX25880.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1408_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18158..18289)
DNA (132bp) protein (44aa)
Cyd operon protein YbgT n=5 Tax=Methylobacterium extorquens RepID=A9W2F7_METEP
Cyd operon protein YbgT {ECO:0000313|EMBL:CDX44563.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cyd operon protein YbgT
SCNpilot_cont_500_bf_scaffold_1408_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18397..19551)
DNA (1155bp) protein (385aa)
Cytochrome d terminal oxidase, subunit II {ECO:0000313|EMBL:CDX28072.1}; EC=1.9.3.- {ECO:0000313|EMBL:CDX28072.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cytochrome d ubiquinol oxidase subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
Cytochrome d oxidase subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TW40_9RHIZ
SCNpilot_cont_500_bf_scaffold_1408_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19570..21141)
DNA (1572bp) protein (524aa)
Cytochrome d terminal oxidase, subunit I {ECO:0000313|EMBL:CDX55174.1}; EC=1.9.3.- {ECO:0000313|EMBL:CDX55174.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Rhizobium freirei PRF 81 RepID=N6USJ1_9RHIZ
SCNpilot_cont_500_bf_scaffold_1408_24
unknown

Not on your lists

comp(21171..21881)
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1408_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22570..22752
DNA (183bp) protein (61aa)
ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UV82_9RHIZ
ABC transporter {ECO:0000313|EMBL:ENN84661.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ABC transporter ATPase/permease
SCNpilot_cont_500_bf_scaffold_1408_26
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22749..24152
DNA (1404bp) protein (468aa)
Transport ATP-binding protein CydC n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0L1_9RHIZ
Putative ABC transporter related, fused ATPase and permease domains (CydD-like) {ECO:0000313|EMBL:CDX27401.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
ABC transporter-like protein
Displaying 26 items

View Taxonomy