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SCNpilot_cont_500_bf_scaffold_1608

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1608_1
bacterium YEK0313, Bacteria

Not on your lists

comp(3..371)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003602971
Transcriptional regulator EutR {ECO:0000313|EMBL:CEJ11924.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1608_2
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

582..1079
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000378C579
Uncharacterized protein {ECO:0000313|EMBL:KJK45345.1}; TaxID=1609137 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
hpaC; monooxygenase HpaC
SCNpilot_cont_500_bf_scaffold_1608_3
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1136..1921
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00038131C1 rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EKE70385.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter baekdonensis B30.;"
short chain dehydrogenase family protein 23
SCNpilot_cont_500_bf_scaffold_1608_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2043..3278
DNA (1236bp) protein (412aa)
Oxygenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UYB4_9RHIZ rbh
Oxygenase {ECO:0000313|EMBL:ENN85761.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_1608_5
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3542..4009
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KTG5_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB47358.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_1608_6
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4443..11477)
DNA (7035bp) protein (2345aa)
JagD n=1 Tax=Janthinobacterium agaricidamnosum RepID=K7ZX55_9BURK
JagD {ECO:0000313|EMBL:CCJ67648.1}; TaxID=55508 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum.;"
polyketide/nonribosomal protein synthase (partial sequence) (fragment)
SCNpilot_cont_500_bf_scaffold_1608_7

Not on your lists

11528..12436
DNA (909bp) protein (303aa)
4'-phosphopantetheinyltransferase 4N n=1 Tax=uncultured bacterium RepID=H6VUX9_9BACT
4'-phosphopantetheinyltransferase 4N {ECO:0000313|EMBL:AFB69917.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phosphopantetheinyl transferase
SCNpilot_cont_500_bf_scaffold_1608_8
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12462..13256)
DNA (795bp) protein (265aa)
RifR n=1 Tax=Amycolatopsis mediterranei RepID=Q7BUF9_AMYMD
RifR {ECO:0000313|EMBL:AAG52991.1}; TaxID=33910 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (Nocardia mediterranei).;"
rifR; oleoyl-(acyl-carrier-protein) hydrolase
SCNpilot_cont_500_bf_scaffold_1608_9
unknown

Not on your lists

comp(13249..13539)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1608_10
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13604..14746
DNA (1143bp) protein (381aa)
glycosyl transferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000374F0CC rbh
Putative glycosyltransferase {ECO:0000313|EMBL:EJN11421.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
putative glycosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_1608_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14947..15339
DNA (393bp) protein (131aa)
UPI0003CF7E35 related cluster n=1 Tax=unknown RepID=UPI0003CF7E35
Uncharacterized protein {ECO:0000313|EMBL:CDX11728.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1608_12
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16215..17024
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HGF7_BURVI rbh
Uncharacterized protein {ECO:0000313|EMBL:ERJ39514.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1608_trna_1
unknown

Not on your lists

comp(18260..18331)
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1608_13
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18418..18840)
DNA (423bp) protein (141aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y5Y4_9RHIZ
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EHH12858.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
lactoylglutathione lyase-like lyase
SCNpilot_cont_500_bf_scaffold_1608_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18837..19217)
DNA (381bp) protein (127aa)
Putative fimbrial subunit PilA n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FK1_RHILO
Putative fimbrial subunit PilA {ECO:0000313|EMBL:CDX23642.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
fimbrial subunit PilA
SCNpilot_cont_500_bf_scaffold_1608_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19326..20225
DNA (900bp) protein (300aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Pseudouridine synthase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FK0_RHILO rbh
SCNpilot_cont_500_bf_scaffold_1608_16
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20434..21345
DNA (912bp) protein (304aa)
RNA polymerase sigma factor RpoH n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZI0_MESOW rbh
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_500_bf_scaffold_1608_17
unknown

Not on your lists

21989..22249
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1608_18
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22450..23109)
DNA (660bp) protein (220aa)
peroxidase (EC:1.11.1.7) rbh
Peroxidase {ECO:0000313|EMBL:ADV10560.1}; EC=1.11.1.7 {ECO:0000313|EMBL:ADV10560.1};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Peroxidase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7F5_MESCW rbh
SCNpilot_cont_500_bf_scaffold_1608_19
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23438..23803)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZH7_MESOW
hypothetical protein; K09888 cell division protein ZapA
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_cont_500_bf_scaffold_1608_20
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23808..24080)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Mesorhizobium RepID=V7FFZ8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX68773.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1608_21
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24352..26343
DNA (1992bp) protein (664aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
UPI0003CEA9A5 related cluster n=1 Tax=unknown RepID=UPI0003CEA9A5 rbh
transketolase rbh
SCNpilot_cont_500_bf_scaffold_1608_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26501..27511
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FG90_9RHIZ rbh
glyceraldehyde-3-phosphate dehydrogenase, type I rbh
SCNpilot_cont_500_bf_scaffold_1608_23
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27733..29106
DNA (1374bp) protein (458aa)
UPI0003CE8071 related cluster n=1 Tax=unknown RepID=UPI0003CE8071 rbh
NhaP-type Na+(K+)/H+ antiporter rbh
Potassium transporter CPA {ECO:0000313|EMBL:ESY80695.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
Displaying 24 items

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