ggKbase home page

SCNpilot_cont_500_bf_scaffold_1626

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1626_1
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2793
DNA (2793bp) protein (931aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0J9_MESOW rbh
PAS/PAC sensor hybrid histidine kinase rbh
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AEH85918.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1626_2
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3314..4261
DNA (948bp) protein (316aa)
Phosphate-binding protein PstS n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIM8_MESAW rbh
phosphate ABC transporter, phosphate-binding protein rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_1626_3
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4330..5316
DNA (987bp) protein (329aa)
UPI0003D06570 related cluster n=1 Tax=unknown RepID=UPI0003D06570 rbh
Phosphate transporter permease subunit PstC {ECO:0000313|EMBL:ESY97833.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
phosphate ABC transporter, permease protein PstC rbh
SCNpilot_cont_500_bf_scaffold_1626_4
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5321..6178
DNA (858bp) protein (286aa)
UPI0003CF01BC related cluster n=1 Tax=unknown RepID=UPI0003CF01BC rbh
Phosphate transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX34605.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
phosphate ABC transporter permease; K02038 phosphate transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1626_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6184..6978
DNA (795bp) protein (265aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
phosphate ABC transporter ATPase (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] rbh
Phosphate ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFX3_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1626_6
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7006..7713
DNA (708bp) protein (236aa)
UPI0003CF57F8 related cluster n=1 Tax=unknown RepID=UPI0003CF57F8 rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
phosphate uptake regulatory protein PhoU; K02039 phosphate transport system protein rbh
SCNpilot_cont_500_bf_scaffold_1626_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7733..8422
DNA (690bp) protein (230aa)
Phosphate regulon transcriptional regulatory protein PhoB n=4 Tax=Mesorhizobium RepID=E8T8C4_MESCW rbh
two component transcriptional regulator PhoB, winged helix family; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB rbh
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:AID32875.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_1626_8
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8585..9838)
DNA (1254bp) protein (418aa)
UPI0003CF0B1D related cluster n=1 Tax=unknown RepID=UPI0003CF0B1D rbh
ROK family protein {ECO:0000313|EMBL:CDX34618.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
ROK family protein rbh
SCNpilot_cont_500_bf_scaffold_1626_9
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10199..11239
DNA (1041bp) protein (347aa)
D-xylose ABC transporter, substrate-binding protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHC7_MESAW rbh
D-xylose ABC transporter, substrate-binding protein rbh
D-xylose ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB43925.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_1626_10
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11484..12836
DNA (1353bp) protein (451aa)
UPI0003CFC5F4 related cluster n=1 Tax=unknown RepID=UPI0003CFC5F4 rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:ESZ26728.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
inner-membrane translocator; K10544 D-xylose transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1626_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12848..13663
DNA (816bp) protein (272aa)
ABC-transport system ATP binding protein; K10545 D-xylose transport system ATP-binding protein [EC:3.6.3.17] rbh
sugar ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI00036A94AB rbh
ABC-transport system ATP binding protein {ECO:0000313|EMBL:BAB50546.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1626_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13809..15431
DNA (1623bp) protein (541aa)
CHASE domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0L0_MESOW rbh
CHASE domain-containing protein rbh
CHASE domain protein {ECO:0000313|EMBL:AEH85929.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1626_13
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15547..15792)
DNA (246bp) protein (82aa)
Uncharacterized protein n=4 Tax=Mesorhizobium RepID=V7EZQ8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ11699.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1626_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15879..16205)
DNA (327bp) protein (109aa)
Mlr3707 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FM4_RHILO
hypothetical protein
Mlr3707 protein {ECO:0000313|EMBL:BAB50543.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1626_15
unknown

Not on your lists

comp(16292..16471)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1626_16
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16591..17625)
DNA (1035bp) protein (345aa)
Signal transduction histidine kinase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KF22_MESAW rbh
signal transduction histidine kinase rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:AGB43932.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_1626_17
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17837..18001)
DNA (165bp) protein (55aa)
UPI0003D02BB8 related cluster n=1 Tax=unknown RepID=UPI0003D02BB8
hypothetical protein
UPF0391 membrane protein X737_02120 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_1626_18
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18278..19072)
DNA (795bp) protein (265aa)
UPI0003D00552 related cluster n=1 Tax=unknown RepID=UPI0003D00552 rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:ESZ11704.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
response regulator receiver protein rbh
SCNpilot_cont_500_bf_scaffold_1626_19
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19189..19494
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0L7_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY70276.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_500_bf_scaffold_1626_20
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19498..20049
DNA (552bp) protein (184aa)
UPI0003CEFF29 related cluster n=1 Tax=unknown RepID=UPI0003CEFF29 rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
RNA polymerase sigma factor, sigma-70 family rbh
SCNpilot_cont_500_bf_scaffold_1626_21
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20134..20517)
DNA (384bp) protein (128aa)
Response regulator receiver protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKW9_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:CCV04977.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
response regulator receiver protein
SCNpilot_cont_500_bf_scaffold_1626_22
unknown

Not on your lists

20670..20792
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1626_23
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20798..21490
DNA (693bp) protein (231aa)
Mll3694 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FN2_RHILO rbh
transcriptional regulator rbh
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:AID32859.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_1626_24
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21584..21910
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0M0_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH85939.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1626_25
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22660..23967
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FGC9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV11139.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1626_26
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24056..24232
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EJS2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV04984.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1626_27
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24256..25176)
DNA (921bp) protein (307aa)
UPI0003CFE252 related cluster n=1 Tax=unknown RepID=UPI0003CFE252 rbh
Multidrug transporter {ECO:0000313|EMBL:ESZ21930.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
multidrug resistance protein BmrU; K07029 rbh
SCNpilot_cont_500_bf_scaffold_1626_28
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25525..26808
DNA (1284bp) protein (428aa)
PRC-barrel domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8E4_MESCW rbh
hypothetical protein rbh
PRC-barrel domain protein {ECO:0000313|EMBL:ADV10600.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1626_29
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26856..28412)
DNA (1557bp) protein (519aa)
Sulfatase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FGD2_9RHIZ rbh
Sulfatase {ECO:0000313|EMBL:CCV11144.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
sulfatase rbh
SCNpilot_cont_500_bf_scaffold_1626_30
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28661..29593
DNA (933bp) protein (311aa)
Putative ring-cleaving dioxygenase mhqE {ECO:0000313|EMBL:CCV11145.1}; EC=1.13.11.- {ECO:0000313|EMBL:CCV11145.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Putative ring-cleaving dioxygenase mhqE n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3R6_9RHIZ rbh
aromatic metabolite ABC transporter yodE; K15975 glyoxalase family protein rbh
Displaying items 1-30 of 36 in total

View Taxonomy