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SCNpilot_cont_500_bf_scaffold_1741

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1741_1
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..867
DNA (867bp) protein (289aa)
Amidase, hydantoinase/carbamoylase family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9V5_9RHIZ
Allantoate amidohydrolase {ECO:0000313|EMBL:AJY45225.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
allantoate amidohydrolase
SCNpilot_cont_500_bf_scaffold_1741_2
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

994..2688
DNA (1695bp) protein (565aa)
Cyclic nucleotide-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHW4_9RHIZ rbh
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:CDX41302.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
thioredoxin reductase rbh
SCNpilot_cont_500_bf_scaffold_1741_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2741..3046
DNA (306bp) protein (102aa)
Zn-finger-containing protein n=2 Tax=Mesorhizobium RepID=L0KGP1_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX13686.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Zn-finger-containing protein
SCNpilot_cont_500_bf_scaffold_1741_4
unknown

Not on your lists

3098..3598
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1741_5
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3751..3957
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379C307
Uncharacterized protein {ECO:0000313|EMBL:KGF67105.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1741_6
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4440..4736
DNA (297bp) protein (99aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
Methionine aminopeptidase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZX3_9SPHN
methionine aminopeptidase
SCNpilot_cont_500_bf_scaffold_1741_7
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4963..6687
DNA (1725bp) protein (575aa)
anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase (EC:3.2.1.-); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GX60_CAUCN
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
SCNpilot_cont_500_bf_scaffold_1741_8
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(6769..7596)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B66376
hypothetical protein
Tax=RBG_16_Planctomycetes_59_8_curated
SCNpilot_cont_500_bf_scaffold_1741_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7608..8735)
DNA (1128bp) protein (376aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PES7_9FIRM
NADH-dependent dyhydrogenase family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_cont_500_bf_scaffold_1741_10
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8769..9611)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4K6_MESOW
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEH87326.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1741_11
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9604..10506)
DNA (903bp) protein (301aa)
Spermidine/putrescine ABC transporter, permease protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ53_9RHOB
Spermidine/putrescine ABC transporter, permease protein {ECO:0000313|EMBL:EAP77384.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
ABC transporter permease
SCNpilot_cont_500_bf_scaffold_1741_12
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10503..11576)
DNA (1074bp) protein (358aa)
UPI0003CED46F related cluster n=1 Tax=unknown RepID=UPI0003CED46F rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY34994.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1741_13
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11597..12652)
DNA (1056bp) protein (352aa)
UPI0003CF097F related cluster n=1 Tax=unknown RepID=UPI0003CF097F
ABC transporter {ECO:0000313|EMBL:ESY78889.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
ABC transporter binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1741_14
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

12867..13250
DNA (384bp) protein (128aa)
Uncharacterized protein id=14632573 bin=bin9_gal15 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
cupin
Tax=CSP1_3_Armatimonadetes
SCNpilot_cont_500_bf_scaffold_1741_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13270..14286
DNA (1017bp) protein (339aa)
Glycosyl hydrolase BNR repeat n=1 Tax=uncultured marine group III euryarchaeote KM3-28-E8 RepID=B3V6K0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETX07939.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
BNR repeat-containing glycosyl hydrolase
SCNpilot_cont_500_bf_scaffold_1741_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14321..15010
DNA (690bp) protein (230aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Variovorax sp. CF313 RepID=J3CH68_9BURK
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:EJL71341.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
SCNpilot_cont_500_bf_scaffold_1741_17
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15017..15367
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NVU0_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI72519.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_500_bf_scaffold_1741_18
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

15391..16926
DNA (1536bp) protein (512aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) {ECO:0000313|EMBL:ACM07123.1}; EC=6.3.5.- {ECO:0000313|EMBL:ACM07123.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3U7_THERP rbh
SCNpilot_cont_500_bf_scaffold_1741_19
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16910..18043
DNA (1134bp) protein (378aa)
glycoside hydrolase family 3; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Glycoside hydrolase family 3 domain protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IHJ4_BEII9
SCNpilot_cont_500_bf_scaffold_1741_20
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18067..18555)
DNA (489bp) protein (163aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
acetate kinase; K00925 acetate kinase [EC:2.7.2.1]
acetate kinase n=1 Tax=Rhizobium loti RepID=UPI00036C62AC
Displaying 20 items

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