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SCNpilot_cont_500_bf_scaffold_1905

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1905_1
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36..1139)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2J2_9FIRM
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_500_bf_scaffold_1905_2
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1413..2726
DNA (1314bp) protein (438aa)
pyruvate, phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
Pyruvate phosphate dikinase {ECO:0000313|EMBL:ESY69806.1}; EC=2.7.9.1 {ECO:0000313|EMBL:ESY69806.1};; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
UPI0003CE7A88 related cluster n=1 Tax=unknown RepID=UPI0003CE7A88
SCNpilot_cont_500_bf_scaffold_1905_3
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2862..3968
DNA (1107bp) protein (369aa)
glycosyl transferase family protein; K02849 heptosyltransferase III [EC:2.4.-.-] rbh
UPI0003CE928E related cluster n=1 Tax=unknown RepID=UPI0003CE928E rbh
Glycosyl transferase family 9 {ECO:0000313|EMBL:ESY71573.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_cont_500_bf_scaffold_1905_4
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4094..4831
DNA (738bp) protein (246aa)
UPI0003CECBDC related cluster n=1 Tax=unknown RepID=UPI0003CECBDC rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ESY71572.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
putative xylanase/chitin deacetylase rbh
SCNpilot_cont_500_bf_scaffold_1905_5
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4889..5272)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9V6_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH89895.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1905_6
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5355..5732)
DNA (378bp) protein (126aa)
UPI0003CDE485 related cluster n=1 Tax=unknown RepID=UPI0003CDE485
Uncharacterized protein {ECO:0000313|EMBL:ESY71570.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1905_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5911..7539
DNA (1629bp) protein (543aa)
Putative acyl-CoA synthetase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKH8_9RHIZ rbh
Putative acyl-CoA synthetase {ECO:0000313|EMBL:EHH03663.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II rbh
SCNpilot_cont_500_bf_scaffold_1905_8
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7735..8520
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7X4_MESCW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV14085.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1905_9
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8525..9430)
DNA (906bp) protein (302aa)
UPI0003CF7315 related cluster n=1 Tax=unknown RepID=UPI0003CF7315 rbh
Beta-lactamase {ECO:0000313|EMBL:ESW80472.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
Zn-dependent hydrolase, glyoxylase rbh
SCNpilot_cont_500_bf_scaffold_1905_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9554..10144
DNA (591bp) protein (197aa)
UPI0003CFAF9F related cluster n=1 Tax=unknown RepID=UPI0003CFAF9F rbh
BioY protein {ECO:0000313|EMBL:CDX46146.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
BioY protein; K03523 putative biotin biosynthesis protein BioY rbh
SCNpilot_cont_500_bf_scaffold_1905_11
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10362..10958
DNA (597bp) protein (199aa)
UPI0003CF02C4 related cluster n=1 Tax=unknown RepID=UPI0003CF02C4
Antitermination factor NusG {ECO:0000313|EMBL:ESW80474.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
nusG; putative transcription antitermination protein NusG; K05785 transcriptional antiterminator RfaH
SCNpilot_cont_500_bf_scaffold_1905_12
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11181..12461
DNA (1281bp) protein (427aa)
Glycosyl transferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FBE4_9RHIZ
Glycosyl transferase {ECO:0000313|EMBL:ESX65404.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
glycosyl transferase possibly involved in lipopolysaccharide synthesis rbh
SCNpilot_cont_500_bf_scaffold_1905_13
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13052..13555
DNA (504bp) protein (168aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FE04_9RHIZ
SCNpilot_cont_500_bf_scaffold_1905_14
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13576..14325
DNA (750bp) protein (250aa)
Glycosyl transferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FBC2_9RHIZ rbh
Glycosyl transferase {ECO:0000313|EMBL:ESX65406.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
family 2 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_1905_15
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14512..15207
DNA (696bp) protein (232aa)
SAM-dependent methyltransferase n=1 Tax=Thermosynechococcus sp. NK55 RepID=V5V3K2_9CHRO
SAM-dependent methyltransferase {ECO:0000313|EMBL:AHB87956.1}; TaxID=1394889 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus sp. NK55a.;"
FkbM family methyltransferase
SCNpilot_cont_500_bf_scaffold_1905_16
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15311..16582
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F5B6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV12462.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
O-antigen translocase
SCNpilot_cont_500_bf_scaffold_1905_17
Parcubacteria bacterium GW2011_GWA1_38_7, Parcubacteria, Bacteria

Not on your lists

16579..17322
DNA (744bp) protein (248aa)
Methyltransferase FkbM family n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9Q3W4_9CYAN
Methyltransferase FkbM {ECO:0000313|EMBL:KKQ77594.1}; TaxID=1618783 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_38_7.;"
FkbM family methyltransferase
SCNpilot_cont_500_bf_scaffold_1905_18
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17338..18216
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8G9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV12463.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
glycosyl transferase
SCNpilot_cont_500_bf_scaffold_1905_19
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18293..19027
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJW0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV12464.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SAM-dependent methyltransferase
SCNpilot_cont_500_bf_scaffold_1905_20
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19173..20120
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7M6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV12465.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1905_21
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20163..21053
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F1I8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV10201.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1905_22
unknown

Not on your lists

comp(21060..21908)
DNA (849bp) protein (283aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1905_23
unknown

Not on your lists

comp(21918..22214)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1905_24
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22566..23582
DNA (1017bp) protein (339aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
GalE protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8I3_9RHIZ rbh
GalE protein {ECO:0000313|EMBL:CCV12478.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_500_bf_scaffold_1905_25
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24463..24963
DNA (501bp) protein (167aa)
UPI0003D02F62 related cluster n=1 Tax=unknown RepID=UPI0003D02F62
Uncharacterized protein {ECO:0000313|EMBL:ESZ30544.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1905_26
unknown

Not on your lists

25112..25543
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1905_27
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25720..26460
DNA (741bp) protein (247aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJX3_9RHIZ rbh
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CCV12484.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
capsular polysaccharide biosynthesis protein rbh
SCNpilot_cont_500_bf_scaffold_1905_28
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26457..27236
DNA (780bp) protein (260aa)
UPI0003D00D53 related cluster n=1 Tax=unknown RepID=UPI0003D00D53 rbh
Exopolysaccharide xanthan biosynthesis export protein GumB (Modular protein) {ECO:0000313|EMBL:CCV12486.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
periplasmic protein involved in polysaccharide export rbh
SCNpilot_cont_500_bf_scaffold_1905_29
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27282..29660
DNA (2379bp) protein (793aa)
Exopolysaccharide biosynthesis protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FE08_9RHIZ rbh
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ESX65410.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
capsular exopolysaccharide biosynthesis protein rbh
SCNpilot_cont_500_bf_scaffold_1905_30
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29773..30807
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8J2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV12488.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein rbh
Displaying items 1-30 of 36 in total

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