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SCNpilot_cont_500_bf_scaffold_1930

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1930_1
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..173
DNA (171bp) protein (57aa)
UPI0003CE7BCC related cluster n=1 Tax=unknown RepID=UPI0003CE7BCC
Uncharacterized protein {ECO:0000313|EMBL:CDX38322.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1930_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(270..716)
DNA (447bp) protein (149aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YA67_MESOW
SCNpilot_cont_500_bf_scaffold_1930_3
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

959..1870
DNA (912bp) protein (304aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY10776.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
SCNpilot_cont_500_bf_scaffold_1930_4
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1867..3168)
DNA (1302bp) protein (434aa)
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex {ECO:0000313|EMBL:CDX38329.1}; EC=2.3.1.168 {ECO:0000313|EMBL:CDX38329.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHS1_9RHIZ rbh
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component rbh
SCNpilot_cont_500_bf_scaffold_1930_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3171..4190)
DNA (1020bp) protein (340aa)
transketolase; K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] rbh
UPI0003D02A16 related cluster n=1 Tax=unknown RepID=UPI0003D02A16 rbh
2-oxoisovalerate dehydrogenase subunit beta {ECO:0000313|EMBL:ESZ10402.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_1930_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4196..5428)
DNA (1233bp) protein (411aa)
2-oxoisovalerate dehydrogenase subunit alpha {ECO:0000313|EMBL:CDX27665.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CDX27665.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4] rbh
2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEK6_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1930_7
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6183..7223
DNA (1041bp) protein (347aa)
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] rbh
UPI0003CF385D related cluster n=1 Tax=unknown RepID=UPI0003CF385D rbh
DNA polymerase III subunit delta {ECO:0000313|EMBL:ESY62605.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_500_bf_scaffold_1930_8
unknown

Not on your lists

7591..8196
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1930_9
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8138..8842)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2DEZ2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEA09049.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_500_bf_scaffold_1930_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9047..9631
DNA (585bp) protein (195aa)
Regulatory protein TetR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TK71_MESCW
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADV11443.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1930_11
unknown

Not on your lists

9887..10093
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1930_12
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10600..11484)
DNA (885bp) protein (295aa)
Chromosome-partitioning protein parB n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EI40_9RHIZ rbh
Chromosome-partitioning protein parB {ECO:0000313|EMBL:CCV04289.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family rbh
SCNpilot_cont_500_bf_scaffold_1930_13
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11559..12359)
DNA (801bp) protein (267aa)
UPI0003CFA3E7 related cluster n=1 Tax=unknown RepID=UPI0003CFA3E7 rbh
Chromosome partitioning protein ParA {ECO:0000313|EMBL:ESZ10398.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
chromosome partitioning protein, ParA; K03496 chromosome partitioning protein rbh
SCNpilot_cont_500_bf_scaffold_1930_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12404..13036)
DNA (633bp) protein (211aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
gidB; 16S rRNA methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] rbh
UPI0003CE649E related cluster n=1 Tax=unknown RepID=UPI0003CE649E rbh
SCNpilot_cont_500_bf_scaffold_1930_15
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13033..14907)
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F2N1_9RHIZ rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
glucose-inhibited division protein A rbh
SCNpilot_cont_500_bf_scaffold_1930_16
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15200..16519)
DNA (1320bp) protein (440aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
small GTP-binding protein; K03650 tRNA modification GTPase [EC:3.6.-.-] rbh
tRNA modification GTPase MnmE n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5EZ59_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1930_17
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16756..17502
DNA (747bp) protein (249aa)
UPI0003CFEA63 related cluster n=1 Tax=unknown RepID=UPI0003CFEA63
Spermatogenesis-associated protein 20 {ECO:0000313|EMBL:ESZ10394.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein; K06888
Displaying 17 items

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