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SCNpilot_cont_500_bf_scaffold_3257

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3257_1
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..459
DNA (459bp) protein (153aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhizobium sp. CF142 RepID=J2KVN1_9RHIZ
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EJJ25247.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
two-component response regulator
SCNpilot_cont_500_bf_scaffold_3257_2
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

453..1787
DNA (1335bp) protein (445aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
two component sensor kinase (EC:2.7.1.-)
Signal transduction histidine kinase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VXH0_9RHIZ
SCNpilot_cont_500_bf_scaffold_3257_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1801..2742)
DNA (942bp) protein (314aa)
UPI0003CFAF8C related cluster n=1 Tax=unknown RepID=UPI0003CFAF8C rbh
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:CDX53879.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
esterase/lipase rbh
SCNpilot_cont_500_bf_scaffold_3257_4
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2891..3673)
DNA (783bp) protein (261aa)
Crotonobetainyl CoA hydratase {ECO:0000313|EMBL:CDX26947.1}; EC=4.2.1.- {ECO:0000313|EMBL:CDX26947.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
enoyl-CoA hydratase/isomerase; K08299 carnitinyl-CoA dehydratase [EC:4.2.1.-] rbh
Carnitinyl-CoA dehydratase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA18_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_3257_5
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3666..5678)
DNA (2013bp) protein (671aa)
UPI0003D051E4 related cluster n=1 Tax=unknown RepID=UPI0003D051E4 rbh
acyl-CoA synthetase (NDP forming) rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:ESZ57345.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
SCNpilot_cont_500_bf_scaffold_3257_6
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5682..6845)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDX26943.1}; EC=1.3.8.- {ECO:0000313|EMBL:CDX26943.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003CF591B related cluster n=1 Tax=unknown RepID=UPI0003CF591B rbh
acyl-CoA dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_3257_7
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6849..7967)
DNA (1119bp) protein (373aa)
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
UPI0003D05789 related cluster n=1 Tax=unknown RepID=UPI0003D05789 rbh
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein rbh
SCNpilot_cont_500_bf_scaffold_3257_8
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7964..8518)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0S5_9RHIZ
putative HD phosphohydrolase rbh
Peptidase {ECO:0000313|EMBL:KGF67913.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
SCNpilot_cont_500_bf_scaffold_3257_9
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8539..9444)
DNA (906bp) protein (302aa)
Mlr5039 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CR5_RHILO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX15241.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3257_10
unknown

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comp(9441..9704)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3257_11
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10445..11866
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=1 Tax=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) RepID=A9MR22_SALAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX21317.1}; TaxID=41514 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980).;"
SCNpilot_cont_500_bf_scaffold_3257_12
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11983..12192)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F195_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCV09928.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_500_bf_scaffold_3257_13
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12355..12846)
DNA (492bp) protein (164aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAH1_MESCW
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADV09592.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_3257_14
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12945..14270)
DNA (1326bp) protein (442aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] rbh
xylose isomerase n=1 Tax=Rhizobium loti RepID=UPI00037301DC rbh
SCNpilot_cont_500_bf_scaffold_3257_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14382..14744
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F0R0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX15603.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3257_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14972..16426)
DNA (1455bp) protein (485aa)
Xylulokinase {ECO:0000313|EMBL:CDX12940.1}; EC=2.7.1.- {ECO:0000313|EMBL:CDX12940.1};; EC=2.7.1.17 {ECO:0000313|EMBL:CDX12940.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
xylulokinase (EC:2.7.1.17); K00854 xylulokinase [EC:2.7.1.17] rbh
Xylulokinase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CS0_RHILO rbh
SCNpilot_cont_500_bf_scaffold_3257_17
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16509..17813)
DNA (1305bp) protein (435aa)
UPI0003CFE2C1 related cluster n=1 Tax=unknown RepID=UPI0003CFE2C1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ60277.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3257_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17824..18447)
DNA (624bp) protein (208aa)
UPI0003CFD5DB related cluster n=1 Tax=unknown RepID=UPI0003CFD5DB rbh
Lysine exporter LysE/YggA {ECO:0000313|EMBL:CDX53920.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
lysine exporter protein LysE/YggA rbh
SCNpilot_cont_500_bf_scaffold_3257_19
unknown

Not on your lists

comp(18632..18958)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3257_20
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18988..19749
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000375B86F rbh
Ykud domain protein {ECO:0000313|EMBL:AID33882.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3257_21
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19853..21019
DNA (1167bp) protein (389aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] rbh
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobiu
6-phosphofructokinase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CS6_RHILO rbh
SCNpilot_cont_500_bf_scaffold_3257_22
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21231..21704
DNA (474bp) protein (158aa)
Lactamase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FQB0_9RHIZ
Lactamase {ECO:0000313|EMBL:ESX81205.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3257_23
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21910..23157
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D2FB8 rbh
Tetracycline resistance protein {ECO:0000313|EMBL:EIT70662.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
tetA; tetracycline resistance protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein rbh
SCNpilot_cont_500_bf_scaffold_3257_24
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23493..24026
DNA (534bp) protein (178aa)
serine protease; K01362 [EC:3.4.21.-]
Serine protease, HtrA/DegQ/DegS family n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CS8_RHILO
Serine protease, HtrA/DegQ/DegS family {ECO:0000313|EMBL:BAB51543.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Displaying 24 items

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