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SCNpilot_cont_500_bf_scaffold_3396

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3396_1
unknown

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1..81
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3396_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(201..617)
DNA (417bp) protein (139aa)
UPI0003CF0B99 related cluster n=1 Tax=unknown RepID=UPI0003CF0B99
UPF0310 protein MPL3356_200027 {ECO:0000256|HAMAP-Rule:MF_00771}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3396_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(617..994)
DNA (378bp) protein (126aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCP7_MESCW
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADV10889.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_3396_4
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1065..1844)
DNA (780bp) protein (260aa)
DNA-binding protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F6T9_9RHIZ rbh
Helix-turn-helix type 11 domain-containing protein {ECO:0000313|EMBL:CDX24065.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Helix-turn-helix type 11 domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_3396_5
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1845..2483)
DNA (639bp) protein (213aa)
Peptide chain release factor H n=1 Tax=Rhizobium sp. Pop5 RepID=K0W213_9RHIZ
Peptide chain release factor H {ECO:0000313|EMBL:EJZ17704.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
peptide chain release factor H; K02839 peptide chain release factor
SCNpilot_cont_500_bf_scaffold_3396_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2443..3612)
DNA (1170bp) protein (390aa)
Release factor H-coupled RctB family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C3N5_RHILT rbh
Release factor H-coupled RctB family protein {ECO:0000313|EMBL:EJC77482.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
release factor H-coupled RctB family protein rbh
SCNpilot_cont_500_bf_scaffold_3396_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4362..5450
DNA (1089bp) protein (363aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] rbh
SAM dependent methyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4V3_9RHIZ rbh
SAM dependent methyltransferase {ECO:0000313|EMBL:CDX55276.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_500_bf_scaffold_3396_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5452..6303
DNA (852bp) protein (284aa)
rRNA methylase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMH6_9RHIZ rbh
rRNA methylase {ECO:0000313|EMBL:CCV16239.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
rRNA methylase rbh
SCNpilot_cont_500_bf_scaffold_3396_9
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6320..6805
DNA (486bp) protein (162aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
UPI0003CE8CA3 related cluster n=1 Tax=unknown RepID=UPI0003CE8CA3
SCNpilot_cont_500_bf_scaffold_3396_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6856..7845
DNA (990bp) protein (330aa)
Quinone oxidoreductase, YhdH/YhfP family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCP2_MESCW rbh
YhdH/YhfP family quinone oxidoreductase rbh
Quinone oxidoreductase, YhdH/YhfP family {ECO:0000313|EMBL:ADV10884.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_3396_11
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8062..10347
DNA (2286bp) protein (762aa)
Sensor protein {ECO:0000313|EMBL:CCV16242.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCV16242.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Sensor protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FG18_9RHIZ rbh
PAS domain S-box rbh
SCNpilot_cont_500_bf_scaffold_3396_12
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10569..11336
DNA (768bp) protein (256aa)
Putative hemolysin n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIA4_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX33570.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
putative hemolysin
SCNpilot_cont_500_bf_scaffold_3396_13
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11667..12299)
DNA (633bp) protein (211aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI000367D631 rbh
UPF0126 domain protein {ECO:0000313|EMBL:AID32514.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3396_14
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12399..13028)
DNA (630bp) protein (210aa)
Protein GrpE n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCN8_MESCW rbh
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE rbh
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_3396_15
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13243..13446
DNA (204bp) protein (68aa)
UPI0003CFAFE6 related cluster n=1 Tax=unknown RepID=UPI0003CFAFE6
Uncharacterized protein {ECO:0000313|EMBL:ESZ24458.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3396_16
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13688..14491
DNA (804bp) protein (268aa)
UPI0003CE356F related cluster n=1 Tax=unknown RepID=UPI0003CE356F rbh
Fatty acid desaturase {ECO:0000313|EMBL:ESY96455.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
fatty acid desaturase rbh
SCNpilot_cont_500_bf_scaffold_3396_17
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14831..15412
DNA (582bp) protein (194aa)
hemH; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Putative phosphoribosylaminoimidazole-succinocarboxamide synthase 2; EC=6.3.2.6;; SAICAR synthetase 2; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Putative phosphoribosylaminoimidazole-succinocarboxamide synthase 2 n=2 Tax=Rhizobium loti (strain MAFF303099) RepID=PUR72_RHILO
SCNpilot_cont_500_bf_scaffold_3396_18
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15467..16087)
DNA (621bp) protein (207aa)
intracellular protease, PfpI family; K05520 protease I [EC:3.2.-.-] rbh
Intracellular protease, PfpI family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5J9_MESOW rbh
Glutamine amidotransferase {ECO:0000313|EMBL:ESY70573.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_500_bf_scaffold_3396_19
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16217..16741)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMH8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX32632.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3396_20
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16880..17644)
DNA (765bp) protein (255aa)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000256|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000256|HAMAP-Rule:MF_00063}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
phosphoadenosine phosphosulfate reductase (EC:1.8.4.8); K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8] rbh
Phosphoadenosine phosphosulfate reductase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKP8_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_3396_21
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17619..19289)
DNA (1671bp) protein (557aa)
nitrite and sulfite reductase 4Fe-4S region; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] rbh
Sulfite reductase n=3 Tax=Mesorhizobium RepID=V7GT49_9RHIZ rbh
Sulfite reductase hemoprotein subunit {ECO:0000313|EMBL:CDX24031.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_cont_500_bf_scaffold_3396_22
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19361..19666)
DNA (306bp) protein (102aa)
UPI0003D058DA related cluster n=1 Tax=unknown RepID=UPI0003D058DA
Uncharacterized protein {ECO:0000313|EMBL:ESZ22200.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3396_23
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19663..20022)
DNA (360bp) protein (120aa)
Siroheme synthetase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4W9_9RHIZ
Siroheme synthetase {ECO:0000313|EMBL:EHH13204.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
uroporphyrin-III C-methyltransferase
Displaying 23 items

View Taxonomy