ggKbase home page

SCNpilot_cont_500_bf_scaffold_3715

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3715_1
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235..1443)
DNA (1209bp) protein (403aa)
ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BD216
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EKF18180.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
extracellular ligand-binding receptor rbh
SCNpilot_cont_500_bf_scaffold_3715_2
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1591..2529)
DNA (939bp) protein (313aa)
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A4958
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF18172.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_3715_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3269..3724
DNA (456bp) protein (152aa)
monooxygenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000368934F
monooxygenase FAD-binding
Monooxygenase {ECO:0000313|EMBL:EXL03317.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_cont_500_bf_scaffold_3715_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3762..4568
DNA (807bp) protein (269aa)
dioxygenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003817750
Putative dioxygenase {ECO:0000313|EMBL:EKF18174.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
putative dioxygenase rbh
SCNpilot_cont_500_bf_scaffold_3715_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4588..5472
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000364FF2F rbh
alpha/beta hydrolase domain-containing protein
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:ABS17091.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_3715_6
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5501..6463
DNA (963bp) protein (321aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
dihydrodipicolinate synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI000361C762 rbh
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EKF18178.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_cont_500_bf_scaffold_3715_7
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6499..7050
DNA (552bp) protein (184aa)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6); K00452 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] rbh
3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LKD4_9RHIZ
SCNpilot_cont_500_bf_scaffold_3715_8
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7151..8317
DNA (1167bp) protein (389aa)
ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036076F2 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF18171.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC transporter ATP-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_3715_9
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8489..9403
DNA (915bp) protein (305aa)
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI00037154AB rbh
Inner-membrane translocator {ECO:0000313|EMBL:EKF18170.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_3715_10
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9422..10405
DNA (984bp) protein (328aa)
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI0003708537 rbh
Inner-membrane translocator {ECO:0000313|EMBL:EKF18169.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_3715_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10402..11160
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F76C7 rbh
ABC transporter {ECO:0000313|EMBL:EKF18168.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_3715_12
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11154..11855
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003698834 rbh
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:EKF18167.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
amino acid ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_3715_13
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11842..12663
DNA (822bp) protein (274aa)
Probable L-aspartate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01265}; EC=1.4.1.21 {ECO:0000256|HAMAP-Rule:MF_01265};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
L-aspartate dehydrogenase; K06989 aspartate dehydrogenase [EC:1.4.1.21]
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E5E56
SCNpilot_cont_500_bf_scaffold_3715_14
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12688..12894
DNA (207bp) protein (69aa)
gabD; succinate-semialdehyde dehydrogenase (NADP+) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
aldehyde dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000380599D
Aldehyde dehydrogenase {ECO:0000313|EMBL:EKF18177.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Displaying 14 items

View Taxonomy