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SCNpilot_cont_500_bf_scaffold_3890

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3890_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..457)
DNA (456bp) protein (152aa)
IclR helix-turn-helix domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XA07_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDX35390.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Transcriptional regulator, IclR family
SCNpilot_cont_500_bf_scaffold_3890_2
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(719..1483)
DNA (765bp) protein (255aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:KIG01746.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KIG01746.1};; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
short-chain dehydrogenase n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002E6E316
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_3890_3
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1770..3032
DNA (1263bp) protein (421aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ERQ1_9RHIZ
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCV07539.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_3890_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3057..4583
DNA (1527bp) protein (509aa)
ABC transporter related n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU37_9RHIZ
ABC transporter related {ECO:0000313|EMBL:CCV07540.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC transporter
SCNpilot_cont_500_bf_scaffold_3890_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4589..5584
DNA (996bp) protein (332aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Frankia sp. CN3 RepID=G6HD48_9ACTO
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCV07541.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC transporter permease; K10440 ribose transport system permease protein
SCNpilot_cont_500_bf_scaffold_3890_6
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5628..6053
DNA (426bp) protein (142aa)
cupin n=1 Tax=Aureimonas ureilytica RepID=UPI0003778907
Uncharacterized protein {ECO:0000313|EMBL:GAK69576.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3890_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6083..6871
DNA (789bp) protein (263aa)
N-acyl homoserine lactonase AttM {ECO:0000250|UniProtKB:Q8VPD5}; Short=AHL-lactonase AttM {ECO:0000250|UniProtKB:Q8VPD5};; EC=3.1.1.81;; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
N-acyl homoserine lactonase AttM n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=AHLLM_RHIL3
putative beta lactamase/homoserine lactonase
SCNpilot_cont_500_bf_scaffold_3890_8
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6919..7767
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035DB44B rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KJF65612.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
5-carboxymethyl-2-hydroxymuconate delta-isomerase rbh
SCNpilot_cont_500_bf_scaffold_3890_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7846..8628
DNA (783bp) protein (261aa)
cyclopentanol dehydrogenase (EC:1.1.1.163)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035F4966 rbh
Cyclopentanol dehydrogenase {ECO:0000313|EMBL:KKB80680.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCNpilot_cont_500_bf_scaffold_3890_10
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9607..9789
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003810D4D
Agmatinase, putative {ECO:0000313|EMBL:EEE35699.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium KLH11.;"
putative agmatinase
SCNpilot_cont_500_bf_scaffold_3890_11
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9825..10319)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E1CFB2
XRE family transcriptional regulator {ECO:0000313|EMBL:EWT03617.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3890_12
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10561..11358
DNA (798bp) protein (266aa)
Putative amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6APK4_PSERE
putative amino acid ABC transporter substrate-binding protein
Putative amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAN47618.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
Displaying 12 items

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