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SCNpilot_cont_500_bf_scaffold_6210

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6210_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..129
DNA (129bp) protein (43aa)
Replicative DNA helicase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKN6_9RHIZ
Replicative DNA helicase {ECO:0000313|EMBL:EHK58734.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
replicative DNA helicase
SCNpilot_cont_500_bf_scaffold_6210_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(139..1059)
DNA (921bp) protein (307aa)
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B5929 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY66995.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator rbh
SCNpilot_cont_500_bf_scaffold_6210_3
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2344..3495
DNA (1152bp) protein (384aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
catalase/peroxidase; K03782 catalase-peroxidase [EC:1.11.1.21]
catalase/hydroperoxidase HPI(I) n=1 Tax=Hoeflea sp. 108 RepID=UPI00037EDE7E
SCNpilot_cont_500_bf_scaffold_6210_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3801..4358
DNA (558bp) protein (186aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGX3_MESOW rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX51755.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
GCN5-like N-acetyltransferase rbh
SCNpilot_cont_500_bf_scaffold_6210_5
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4441..5034)
DNA (594bp) protein (198aa)
D-aminopeptidase; K01266 D-aminopeptidase [EC:3.4.11.19]
aminopeptidase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030BC8CC
Peptidase S58 DmpA {ECO:0000313|EMBL:EEZ34337.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
SCNpilot_cont_500_bf_scaffold_6210_6
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5094..5348)
DNA (255bp) protein (85aa)
L-aminopeptidase/D-esterase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KK98_MESAW
L-aminopeptidase/D-esterase
L-aminopeptidase/D-esterase {ECO:0000313|EMBL:AGB44764.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_500_bf_scaffold_6210_7
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5389..5805)
DNA (417bp) protein (139aa)
UPI0003D002CB related cluster n=1 Tax=unknown RepID=UPI0003D002CB
MerR family transcriptional regulator {ECO:0000313|EMBL:ESZ28795.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
transcription regulator MerR DNA binding protein
SCNpilot_cont_500_bf_scaffold_6210_8
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5826..7376)
DNA (1551bp) protein (517aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JXY9_BURP1
Uncharacterized protein {ECO:0000313|EMBL:KFC70175.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6210_9
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7577..8080)
DNA (504bp) protein (168aa)
hypothetical protein BCCGELA001_31398, partial n=1 Tax=Bradyrhizobium sp. CCGE-LA001 RepID=UPI0002AA944D id=5225051 bin=16ft_combo_ws3_JS1 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_500_bf_scaffold_6210_10
unknown

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8205..8363
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6210_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8633..10015
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003681558 rbh
Uncharacterized HTH-type transcriptional regulator RHOS4_30730 {ECO:0000313|EMBL:CDX51758.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_6210_12
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10027..11211)
DNA (1185bp) protein (395aa)
UPI0003CFF854 related cluster n=1 Tax=unknown RepID=UPI0003CFF854 rbh
MFS transporter {ECO:0000313|EMBL:ESZ28793.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_6210_13
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11333..11542)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FM97_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESW81458.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6210_14
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11699..13363)
DNA (1665bp) protein (555aa)
Na+/Picotransporter n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGX5_MESOW rbh
Na+/Picotransporter; K03324 phosphate:Na+ symporter rbh
Na+/Picotransporter {ECO:0000313|EMBL:AEH86921.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_6210_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13655..14029
DNA (375bp) protein (125aa)
Putative integral membrane protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KL22_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX51763.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative integral membrane protein
SCNpilot_cont_500_bf_scaffold_6210_16
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14902..16032
DNA (1131bp) protein (377aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-]
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
DNA primase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TK91_MESCW
SCNpilot_cont_500_bf_scaffold_6210_17
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16474..18504
DNA (2031bp) protein (677aa)
RNA polymerase sigma factor RpoD n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJR1_MESAW rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
RNA polymerase sigma factor, sigma-70 family rbh
SCNpilot_cont_500_bf_scaffold_6210_18
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19328..19621
DNA (294bp) protein (98aa)
UPI0003D06CFC related cluster n=1 Tax=unknown RepID=UPI0003D06CFC
Uncharacterized protein {ECO:0000313|EMBL:CDX24249.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
GYD family protein
SCNpilot_cont_500_bf_scaffold_6210_19
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19742..20851)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000374D061 rbh
LuxR family transcriptional regulator protein {ECO:0000313|EMBL:AJD41699.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
LuxR family transcriptional regulator
Displaying 19 items

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